| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1453 |
|---|
| Symbol | |
|---|
| ID | 5869218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1621830 |
|---|
| End bp | 1622597 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641546557 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001667696 |
|---|
| Protein GI | 167032465 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.150556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACCAC TTCTGATCAC CCTGCTCATC GTGGCGGGCA TCGCGCTGCT GATCGTGATC
GGCTACCTCA ACAATGTGGT CGAGAACGGC AAGCTGGAAC GCGCCCGGAC GAAGATCGAG
CTGGCCGACC GCCTGCGCCG CTGTGGCGAA ATCACCGAGA CCTTCCCCGG CCAGTTCATG
ACCCCAGCCC TCAAGCTGCT GCTGACACGC CTGGAGCTGA ACCTCAACCA GCGCCTGCTG
GCGGTGGACA AGCACAATGC CGAACTCAAG GCGCGCATCG CCGAACTGGA AGGGCTGATT
GCACTGGGCG ACAAGGTACC GGTGAACAAC CCACCGAACC CGATCCACAC CGAGGTCAAG
GCCAAGGACG TGCGCTTCCT GCTGGAGGCC ATGCACAACC AGGTGACCCG TGCGGCCCAG
GAAGGCTTCC TGGCCACGCC CGAGGCCAAG CACTGGATCA AGGAAATTCG CCATATCCTG
GTGCTGCTGC ATATCGAGTT CTTCAACAAC CTCGGCCAGC AGGCCCTGCA GAAAGGCCAG
CCCGGCCAGG CGCGGCTGGC GTTCGAGCGC GGCGTGCAAT ACCTGCGCAA GCAACCGGAG
CCGAAGGTGT ATGAAGAGCA GCTCACGTAT CTCGAGAAAC TGCTGGCCCG CGCCAACGCC
CAGGTGCTCG ACCGCATGAC CCCGGCCGAG GACGAGCACA ACGAATTGAC CGACGGGCTC
AAGACCGATG AAGAAGAGAC CTGGAAGAAG AAGGTGATGT ACGACTAA
|
|---|
| Protein sequence | MTPLLITLLI VAGIALLIVI GYLNNVVENG KLERARTKIE LADRLRRCGE ITETFPGQFM
TPALKLLLTR LELNLNQRLL AVDKHNAELK ARIAELEGLI ALGDKVPVNN PPNPIHTEVK
AKDVRFLLEA MHNQVTRAAQ EGFLATPEAK HWIKEIRHIL VLLHIEFFNN LGQQALQKGQ
PGQARLAFER GVQYLRKQPE PKVYEEQLTY LEKLLARANA QVLDRMTPAE DEHNELTDGL
KTDEEETWKK KVMYD
|
|---|
| |