Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1420 |
Symbol | |
ID | 5869184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1589703 |
End bp | 1590434 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546523 |
Product | amidotransferase |
Protein accession | YP_001667663 |
Protein GI | 167032432 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.388788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTTAC GCGTCTGCAT CCTTGAAACC GATGTCCTGC GACCGGAGTT GACCGCGCAG TATCAGGGCT ACGGCAGGAT GTTCGAGCAG CTCTTCTCGC GTCAGCCGAT CGCCGCCGAA TTCCGTGTGT ATAACGTGAT GAACGGCGAC TACCCCGCCG ACAACGAAGT GTTCGATGCC TACCTTGTGA CGGGCAGCAA AGCCGATTCG TTCGGAACCG ACCCGTGGAT CCAAACCCTC AAGGCCTACC TGCTCAAGTT GTACGAGCGC GGTGAGAAGC TGCTGGGTGT GTGTTTTGGC CATCAGTTGC TGGCCTTGAC CCTGGGTGGC AAGGCCGAGC GGGCCGAGAA AGGCTGGGGC GTGGGCATCC ATCGCTACTC GCTGGCGGCG CATGCGCCGT GGATGGACCC GGAGGTGTCG GAGCTGACCT TGCTGATCAG CCACCAGGAC CAGGTGACCG AGCTGCCGGA AGGCGCGACG GTGATTGCCT CAAGCGATTT CTGCCCGAAC GCGGCGTACC ACATTCGCGA CCAGGTGCTG TGCTTCCAGG GCCACCCGGA ATTCGTGCAT GACTACTCCC GCGCGCTGCT CGATGCGCGC CAGGACTACC TGGGGGACGA GGTGTACCAC AAGGCTGTGG CCAGCCTGGC CACCGAGCAC CAGGGCGACC TGGTGGGGGA GTGGATGCTG CGCTTTATCC AGCAGTCGGC GAGCAAAGAT ACCGCTGCAT GA
|
Protein sequence | MSLRVCILET DVLRPELTAQ YQGYGRMFEQ LFSRQPIAAE FRVYNVMNGD YPADNEVFDA YLVTGSKADS FGTDPWIQTL KAYLLKLYER GEKLLGVCFG HQLLALTLGG KAERAEKGWG VGIHRYSLAA HAPWMDPEVS ELTLLISHQD QVTELPEGAT VIASSDFCPN AAYHIRDQVL CFQGHPEFVH DYSRALLDAR QDYLGDEVYH KAVASLATEH QGDLVGEWML RFIQQSASKD TAA
|
| |