| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1340 |
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| Symbol | |
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| ID | 5869104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1492917 |
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| End bp | 1494101 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546443 |
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| Product | peptidase M42 family hydrolase |
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| Protein accession | YP_001667583 |
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| Protein GI | 167032352 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1363] Cellulase M and related proteins |
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| TIGRFAM ID | [TIGR03106] hydrolase, peptidase M42 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC GACTCCCCGA ACCCGATCTC GACTACCTCA AACGTGTGCT CCTGGAAATG
CTCGCCATCC CCAGCCCCAC CGGGTTCACC GATACCATCG TGCGCTACGT TGCCGAACGC
CTGGACGAAC TGGGCATCCC CTTCGAGCTG ACCCGCCGTG GCACCATCCG CGCCACCCTC
AAGGGCCGGC AAACTTCACC CGACCGGGCC GTGTCCGCCC ACCTCGACAC CATCGGCGCC
AGTGTGCGCC AGCTGCAGGA CAACGGCCGC CTGGCCCTGG CGCCAGTGGG TTGCTGGTCC
AGCCGCTTCG CCGAAGGCAG TCGCGTCAGC GTGTTCACCG ATACCGGGGT GTTCCGCGGC
AGCGTTCTGC CGCTGATGGC CAGCGGGCAT GCCTTCAACA CCGCCATCGA CCAGATGCCT
ATCAGCTGGG ATCATGTGGA AGTACGCCTG GACGCCTACT GCGCCACCCG CGCCGACTGC
GAGGCACTGG GCGTGAGCAT CGGTGACTTC GTGGCCTTCG ACCCTTTGCC CGAGTTCACC
GAAAGCGGCC ACATCAGCGC CCGCCATCTG GACGACAAGG CTGGCGTAGC CGCATTGCTG
GCAGCATTGA AGGCCGTGGT GGAAAGCGGC CGGCAACCTT TGATCGATTG CCACCCGCTG
TTCACCATCA CCGAAGAAAC CGGCTCAGGG GCAGCCGGTG CCCTGCCTTG GGACGTCAGC
GAGTTCGTCG GCATCGACAT CGCCCCGGTG GCGCCCGGGC AGGCGTCCAG CGAGCATGCC
GTGAGCGTGG CCATGCAGGA CTCGTCGGGG CCTTACGACT ACCACCTGTC CCGGCACCTG
CTGAAACTGG CCGGCGACCA CGACTTGCCC GTGCGGCGTG ACCTGTTCCG CTATTACTTC
AGCGACGCCC ATTCGGCCGT GACGGCGGGG CACGATATTC GCACTGCGCT GGTGGCGTTT
GGCTGCGATG CCACCCATGG GTACGAGCGT ACCCATATCG ACAGCCTGGC AGCGCTGAGC
CGGTTGTTGT CGGCGTACCT GTTGAGCCCA CCGGTGTTCG CCAGCGATTC GCAACCGGCC
AATGCGTCGC TTGAACGCTT CAGCCATCAG CTGGAGCATG ATGCGCAGAT GGAGAGCGAT
ACGCGGGTGC CGACGGTGGA TAGCCTGGTT GGCAATAAAG GCTGA
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| Protein sequence | MSERLPEPDL DYLKRVLLEM LAIPSPTGFT DTIVRYVAER LDELGIPFEL TRRGTIRATL
KGRQTSPDRA VSAHLDTIGA SVRQLQDNGR LALAPVGCWS SRFAEGSRVS VFTDTGVFRG
SVLPLMASGH AFNTAIDQMP ISWDHVEVRL DAYCATRADC EALGVSIGDF VAFDPLPEFT
ESGHISARHL DDKAGVAALL AALKAVVESG RQPLIDCHPL FTITEETGSG AAGALPWDVS
EFVGIDIAPV APGQASSEHA VSVAMQDSSG PYDYHLSRHL LKLAGDHDLP VRRDLFRYYF
SDAHSAVTAG HDIRTALVAF GCDATHGYER THIDSLAALS RLLSAYLLSP PVFASDSQPA
NASLERFSHQ LEHDAQMESD TRVPTVDSLV GNKG
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