| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1274 |
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| Symbol | cobD |
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| ID | 5869034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1423324 |
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| End bp | 1424232 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641546373 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_001667517 |
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| Protein GI | 167032286 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.272014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGTGG CCTTGCTGAC CGTGGCTGGG GTTGCCCTGG ACGCCTTGCT GGGCGAACCG
CAGCGGCGCC ACCCTTTGGT GGCCTTCGGC AATATGGCCA GTAACCTTGA GCGTCGCCTG
AATGCCGGCG GACGTGGCTG GCGCAGCCAC GGCGTAAGTG CTTGGTTTCT GGCGGTGGTG
CCGCTGACGT TGGTGGCACT GGTGCTGTCG TGGCTGCCGT ACATCGGCTG GCTGGTGGAC
GTGCTGGCGC TGTATTGCGC CGTGGGGCTG CGCAGCCTGG GCGAGCATGT ACTGCCGGTG
GCCAACGCCT TGCGCCAGGG CGACCTGGAA GAGGCGAGGC GCCGGGTCGG TTACCTGGTC
AGCCGCGAAA CCCGCGAACT GGACGAGCCG GCGGTAGCTC GAGCAGCCAC CGAGTCAGTG
CTGGAGAACG GCAGCGACGC GGTGTTCGCC GCGTTGTTCT GGTTTGTGGT GGCGGGTGCG
CCGGGTGTGG TGCTGTACCG CTTGAGCAAT ACGCTGGATG CCATGTGGGG CTACCGCAAT
GAACGCTTCG AACGTTTTGG CTGGTGCGCG GCGCGCATCG ACGATGTGCT CAACTATGTA
CCCGCAAGGC TGGTGGCGCT GACCTACGCG CTACTGGGCA AGACCCGCCT GGCCCTGGCC
TGCTGGCGCA AGCAAGGCCC GCTGTGGGAC AGCCCCAATG CCGGCCCGGT GATGGCTGCC
GGTGCCGGTG CGTTGGGCGT GGAGTTGGGT GGCCCGGCGG TGTACCACGG CGAGCTGCAT
GAGCGCCCAC GCCTGGGCGA GGGGCCGATG GCCGATGCCG ACGCCATCGA ACGCGGCTGG
GGCCTGGTGC AGCGCGGTGT GTGGCTGTGG CTGCTGGTGA TCTGCCTGGG GGCTTATATC
AATGCTTGA
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| Protein sequence | MSVALLTVAG VALDALLGEP QRRHPLVAFG NMASNLERRL NAGGRGWRSH GVSAWFLAVV
PLTLVALVLS WLPYIGWLVD VLALYCAVGL RSLGEHVLPV ANALRQGDLE EARRRVGYLV
SRETRELDEP AVARAATESV LENGSDAVFA ALFWFVVAGA PGVVLYRLSN TLDAMWGYRN
ERFERFGWCA ARIDDVLNYV PARLVALTYA LLGKTRLALA CWRKQGPLWD SPNAGPVMAA
GAGALGVELG GPAVYHGELH ERPRLGEGPM ADADAIERGW GLVQRGVWLW LLVICLGAYI
NA
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