Gene PputGB1_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1208 
Symbol 
ID5868968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1363962 
End bp1364684 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content69% 
IMG OID641546308 
Productphage tail protein I 
Protein accessionYP_001667452 
Protein GI167032221 
COG category[R] General function prediction only 
COG ID[COG4385] Bacteriophage P2-related tail formation protein 
TIGRFAM ID[TIGR01634] phage tail protein, P2 protein I family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00715514 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCTGC TACCGCACAA CGCCACGCTG CTGGAGCGCT CCCTGGAGCG CGCCGGGGAG 
CTGGGCGTGG ACCCGGAAAT CATTCGGGGC GTGGCCGACT CGGCGCGCTG CCCGCCCAAC
TTCCTGCCGT GGCTGGGCTG GGCGCTCAAG GTCGAGGGCT GGGAAGCCGC TTACACCGAC
GACCAACGCC GCGAGCTGAT CCGCGAGGCC ATCCCGGTCC ACAAGACCAA GGGCACTGTC
GGCGCAATCC GGCGCGTGCT GAGGGCGGTG CGGGTCAACG CGGAGTTCAA GGAATGGCAC
CAGATCCCGA ACGCCGCGCC GTACACGTTC CAGGTCACGG CCTGGGCCAA CGACAACCGG
GCGGGCGAGG GTTCGATTAT CTCGCCCGAG CTGGGGGCGC GCCTGCGTGC CCTGGTCGAC
GCCGCGAAGA ACGAGCGCAG CCACTACGAG TTTCGTCTGG GGGCGCGCTT CGACGGCGGC
CTGGTGCTGG GTAACGCCTT CCTGGCGCGC GCGGTGCAGC GTCGATCCAT GGATGCCCAG
GCGGTGCCCG TCGACCCCAT GGCGCAGACG GTGCTGTTTG CCAATGCGCT CAATGCGTTC
AGCGTTTCCC GGCGGTTTGC CGAGGCGCAG GGCGTTCCCA TTCAAGCAGA AGGTGCCCCG
CTGGTGGCCA ACGCGGCGCA TGTGCGCACG GTCGTGCGGG GCTACATGGA GGCTGTTCTA
TGA
 
Protein sequence
MSLLPHNATL LERSLERAGE LGVDPEIIRG VADSARCPPN FLPWLGWALK VEGWEAAYTD 
DQRRELIREA IPVHKTKGTV GAIRRVLRAV RVNAEFKEWH QIPNAAPYTF QVTAWANDNR
AGEGSIISPE LGARLRALVD AAKNERSHYE FRLGARFDGG LVLGNAFLAR AVQRRSMDAQ
AVPVDPMAQT VLFANALNAF SVSRRFAEAQ GVPIQAEGAP LVANAAHVRT VVRGYMEAVL