Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1208 |
Symbol | |
ID | 5868968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1363962 |
End bp | 1364684 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641546308 |
Product | phage tail protein I |
Protein accession | YP_001667452 |
Protein GI | 167032221 |
COG category | [R] General function prediction only |
COG ID | [COG4385] Bacteriophage P2-related tail formation protein |
TIGRFAM ID | [TIGR01634] phage tail protein, P2 protein I family |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00715514 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCTGC TACCGCACAA CGCCACGCTG CTGGAGCGCT CCCTGGAGCG CGCCGGGGAG CTGGGCGTGG ACCCGGAAAT CATTCGGGGC GTGGCCGACT CGGCGCGCTG CCCGCCCAAC TTCCTGCCGT GGCTGGGCTG GGCGCTCAAG GTCGAGGGCT GGGAAGCCGC TTACACCGAC GACCAACGCC GCGAGCTGAT CCGCGAGGCC ATCCCGGTCC ACAAGACCAA GGGCACTGTC GGCGCAATCC GGCGCGTGCT GAGGGCGGTG CGGGTCAACG CGGAGTTCAA GGAATGGCAC CAGATCCCGA ACGCCGCGCC GTACACGTTC CAGGTCACGG CCTGGGCCAA CGACAACCGG GCGGGCGAGG GTTCGATTAT CTCGCCCGAG CTGGGGGCGC GCCTGCGTGC CCTGGTCGAC GCCGCGAAGA ACGAGCGCAG CCACTACGAG TTTCGTCTGG GGGCGCGCTT CGACGGCGGC CTGGTGCTGG GTAACGCCTT CCTGGCGCGC GCGGTGCAGC GTCGATCCAT GGATGCCCAG GCGGTGCCCG TCGACCCCAT GGCGCAGACG GTGCTGTTTG CCAATGCGCT CAATGCGTTC AGCGTTTCCC GGCGGTTTGC CGAGGCGCAG GGCGTTCCCA TTCAAGCAGA AGGTGCCCCG CTGGTGGCCA ACGCGGCGCA TGTGCGCACG GTCGTGCGGG GCTACATGGA GGCTGTTCTA TGA
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Protein sequence | MSLLPHNATL LERSLERAGE LGVDPEIIRG VADSARCPPN FLPWLGWALK VEGWEAAYTD DQRRELIREA IPVHKTKGTV GAIRRVLRAV RVNAEFKEWH QIPNAAPYTF QVTAWANDNR AGEGSIISPE LGARLRALVD AAKNERSHYE FRLGARFDGG LVLGNAFLAR AVQRRSMDAQ AVPVDPMAQT VLFANALNAF SVSRRFAEAQ GVPIQAEGAP LVANAAHVRT VVRGYMEAVL
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