| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1185 |
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| Symbol | |
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| ID | 5868945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1343643 |
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| End bp | 1345322 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546285 |
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| Product | C-5 cytosine-specific DNA methylase |
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| Protein accession | YP_001667429 |
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| Protein GI | 167032198 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00256863 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.326203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCTGC GCAAACACGT ACTTAAACAC TTCCACATGT GCTGCGGCTT AGGCGGCGGC
GCAAAAGGCT TTAATCGCTC CAAGCCTATC GTGGGCAACC TTCAGGCCGA CTGGCAGTGC
ATTGGTGGGG TCGACGTCGA TCCTGCCGGC CTAGCCGACT TCGAGCGCCT GTCAGGCGTG
AAGGGCACAC TGCTTGATCT GTTTACCCGC GATCAGTACA TCCGCTTCCA TGGGAAAGAG
CCGCCACCGG GGTGGAGCGA GGCCACACCG GAGGACATTC GCAAGGCCGC TGGCGGCCAG
CGCCCAGACG CCGTATTCAT CAGCTCACCG TGCAAGGGTG CAAGCGGGCT GCTCTCGGAA
ACGATGAGCC AAACGCCACG CTACCAAGCC CTCAACGAGC TGACCCTGCG CTGCATCTGG
CTGTTCTGTG AGGCATGGGC AGATGACCCA GTTCCGCTGC TGGTGTTCGA GAACGTTCCT
CGCCTTGCCA GCCGCGGGCG GCATCTGCTC GACCAGATCA ACAGGCTGCT CTCCAGCTTT
GGCTACGCCG TCGCCGAAAC CACCCACGAC TGCGGACGTA TTGGGAACCT CGCACAGAGC
CGCAAGCGCT TCCTGCTGGT TGGCCGTCAC GTTGAGAAGG TACCGCCGTT CCTGTACGAA
CCTGAGCAGA AGTCGCTTCG TGCAGTGGGC GATATCCTTG GCCGGATGCC CCTGGCCGGC
GACATTGAAG CAGCAGGCCC GATGCATCGG GTTCCTTCGC TCCAGTGGAA AACGTGGGTA
CGCCTTGCAT TGGTCGAAGC CGGTAAGGAC TGGCGCAGCC TGAACGACCT CGCGATTGAG
GAAGGTTACC TGCGCGACTT CGTGATCGTT CCTGAGGCGT ACTCTGGCTA TTTGGGTGTA
AACGACTGGG ATAAATCCGT GGGAACCGTC GCTGGCAAGT CCCGCCCAAC GAACGGTGCC
TTCTCGATCG CTGACCCACG CGGCAAGGCC GGCGCGTTGC AGTACCAACA GTACGGTGTG
CGCCGCTGGG AGGACACAAG CGGCGCTGTG ATCGGCGTGA AGAGTCCCGG ACAGGGAACC
TTCAGCGTTG CCGATCCACG TCGAGCTGGC GCCGGTTTCG GGAAGTACCA GGTCACGCCA
TACAACAGCC CAGCGGGAAC CGTCATCGCC GGCAGCACTA CCGGGCAGGG CGCCTTTGCC
GTGCAAGACC CCCGCCCTGG TATGCGCCGC ACCAAAGGTG ACGCCTACCT TACCGGCGGG
CACTACGGCG TTGTGCCGTG GGATGGGCCG GCCGGCGCTG TGTCCGCGAG CGCCATGCAC
GACAACGGGC GCTGGAGCGT GGCCGATCCT CGCCTACCGA ATGCCAACGA CCGACTGGCA
TGCGTGATTG AATCGCTGGA CGGCACTTGG CACCGGCCCT TCACTACCTT CGAGCTGGCG
GCCATCCAGA GCCTGGTCGA ACCAGAGGAA CAGCTTGAGC TGGACGGCCT GAGCGACCAA
GCGTGGCGTG AGCGCATCGG CAATGCCGTT CCACCAGCTG CTGCAGAAGC CGTTGCTGAC
GTGATGGGCA CCACCCTTCT GCTCGTTGCC CAGGGCGAAA CGTTCGTGCT GAGCAGCATG
CCGATTTGGG TACGGCCTGT TGCCGTCGGC CTGAGCGTGG CTCAACGGGA GGCAGCATGA
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| Protein sequence | MSLRKHVLKH FHMCCGLGGG AKGFNRSKPI VGNLQADWQC IGGVDVDPAG LADFERLSGV
KGTLLDLFTR DQYIRFHGKE PPPGWSEATP EDIRKAAGGQ RPDAVFISSP CKGASGLLSE
TMSQTPRYQA LNELTLRCIW LFCEAWADDP VPLLVFENVP RLASRGRHLL DQINRLLSSF
GYAVAETTHD CGRIGNLAQS RKRFLLVGRH VEKVPPFLYE PEQKSLRAVG DILGRMPLAG
DIEAAGPMHR VPSLQWKTWV RLALVEAGKD WRSLNDLAIE EGYLRDFVIV PEAYSGYLGV
NDWDKSVGTV AGKSRPTNGA FSIADPRGKA GALQYQQYGV RRWEDTSGAV IGVKSPGQGT
FSVADPRRAG AGFGKYQVTP YNSPAGTVIA GSTTGQGAFA VQDPRPGMRR TKGDAYLTGG
HYGVVPWDGP AGAVSASAMH DNGRWSVADP RLPNANDRLA CVIESLDGTW HRPFTTFELA
AIQSLVEPEE QLELDGLSDQ AWRERIGNAV PPAAAEAVAD VMGTTLLLVA QGETFVLSSM
PIWVRPVAVG LSVAQREAA
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