| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1165 |
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| Symbol | |
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| ID | 5868925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1323987 |
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| End bp | 1324832 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641546265 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001667409 |
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| Protein GI | 167032178 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.645047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.881612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA AGATCATTCG CGTCGGTAAC ATCGAGATCG CCAACGACAA GCCGTTCGTC
CTGTTCGGCG GCATGAACGT CCTGGAATCC CGTGACCTGG CAATGAAGGT CTGCGAAGAG
TATGTGCGGG TTACCGAAAA GCTCGGTATC CCGTATGTGT TCAAGGCCAG CTTCGACAAG
GCCAACCGTT CGTCGGTGAC GTCCTACCGT GGCCCAGGCA TGGAAGAAGG GCTGAAGATC
TTCGAAGAGA TCAAGCGCAC CTTCAACGTG CCGGTGATTA CCGACGTACA CGAGCCTTAC
CAGGCCGAGC CCGTCGCCAA GGTGTGCGAC ATCATCCAGT TGCCGGCTTT CCTGTCGCGG
CAGACTGACC TGGTGGTGGC CATGGCCAAG ACCGGCGCGG TGATCAACAT CAAGAAGGCC
CAGTTCCTCG CCCCCCAGGA AATGAAACAC ATCCTGGCCA AGTGCGAAGA GGCCGGTAAT
GACCAGTTGA TCCTCTGCGA GCGTGGTTCG AGCTTCGGCT ACAACAACCT GGTGGTGGAC
ATGCTCGGCT TCGGCATCAT GAAGCAGTTC GAGTACCCGG TGTTCTTCGA CGTGACCCAC
GCCCTGCAAA TGCCGGGTGG CCGCAGCGAT TCGGCGGGTG GCCGCCGTGC CCAGGTCACC
GACCTGGCCA AGGCCGGCAT GAGTCAGGGC CTGGCCGGGC TGTTCCTCGA GGCCCACCCC
GACCCGGACA ACGCCAAGTG CGATGGCCCA TGCGCCCTGC GCCTGGACAA ACTGGAGCCG
TTCCTGGCCC AGCTCAAGCA ATTGGACGAC CTGGTGAAAA GTTTTCCGAC GGTAGAAACC
GCGTAA
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| Protein sequence | MTQKIIRVGN IEIANDKPFV LFGGMNVLES RDLAMKVCEE YVRVTEKLGI PYVFKASFDK
ANRSSVTSYR GPGMEEGLKI FEEIKRTFNV PVITDVHEPY QAEPVAKVCD IIQLPAFLSR
QTDLVVAMAK TGAVINIKKA QFLAPQEMKH ILAKCEEAGN DQLILCERGS SFGYNNLVVD
MLGFGIMKQF EYPVFFDVTH ALQMPGGRSD SAGGRRAQVT DLAKAGMSQG LAGLFLEAHP
DPDNAKCDGP CALRLDKLEP FLAQLKQLDD LVKSFPTVET A
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