| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1133 |
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| Symbol | |
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| ID | 5868892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1283546 |
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| End bp | 1285897 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546232 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001667377 |
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| Protein GI | 167032146 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCC CTTGGGCCTT TCTATTTCTT GAGTGCAGAG CCAGCGATGG CCTGACATTC
GATCTCGAAC TCCTGCGTCA ACGGGGTTTG AGTGAGGAGC TTGCGGCCTA CTTTCGTGAC
ATGCCGCGCT TCACCCCAGG CAATCACATC GTGAGCCTGA CTATAAACGG CTCACGATCA
GGAACGGTAC AGGCACGCTT TCTGAACGAC GGCAGCTTGT GCATTGACAC TGGCCTGCTC
GAGGCGGGTG GGATTCGGTT GCCGACGGCT GCGGCGAGCG AAAGCCAGGG CTCCTGCATC
GACTTGCTGT CAAGCTACCC ACAGAGTCAG ATACAGGCAG ACCCTCAGTC CGCCAGTGTG
ACCATGGTGG TGCCTGCGCA AGCCCTGCGC CCGGCCGCCG CAGGTGATGA CCTTTCGGCT
TATGACTCAG GTGGGTTCGC TGCAATGTTC AACTACGACG TGTCGATGCT CGATACGCGT
TTCAAGGACG GCAGCAGCAG ATCCTGGACT GCCCTTACCG AGCCGGGTTT GAACCTGGGG
GACTGGATCG TGCGCAGCCG TCAGATTGCC AGTCTGGGGC AACAGGCAAG TCGGCTCAAC
GCACTGGAAG CCTACGCCCA GCGAACGTTC GCCGATCAGG CGACTGTCCT GCAGGTCGGT
CAGATCCAGA TGGGTAACCC CGTGCTGAGC GGCGTTTCGG TTGACGGTTT TCAGCTGTTT
TCCGAGCAGG CGTTGGGCCA TCTACAACAA CGTCGCGTGG TTCAAGGCAT CGCCAAGTCC
CAAGCGAGGG TGGAGATCTA CCAGCGCAAC CGCCTGGTGT ATGCCACCGT CGTGCCGCCA
GGCCCGTTTT CCATTGATAG CCCTGCGCCA GTCGATGCCT TTGCTGAACT GGAAATGGTT
ATCCATGAAG CGGACGGTGA GGAGCGTCGC CTGACCTTGC CTGCCTCGCC GATGGCGGCG
GGGTTGTCAG GAGGATACCA GTTCGGCATT GGTCAACTTC GCCACAGTCG CGCCGCGTCA
CCTTGGGTGC TTAGCGCCGG GTGGAGCGGG AGTGTGCTTG ATGGCTTGGA AGTGGGGGGA
GGGCTAATTG CGACCGACAG CTATCAGGCT ACCGGGTTCG CGCTCGGTGC TCAGCCGTGG
ACGCAGGCTC AGATGCAATG GTCGCTGGGC TACTCGCAGC CGTTGCATCA GGAGAGGGGG
ATGCAAAGCC AGATGACCCT GAACCAGCAG TTTGCCGGCG GATGGGGAGC GGGCTTGACC
TATGGGCTGC AGAGCCAAAG TTATCAGGAC CTCCAGCAGG CGCTTGAGCC GTCAGGTCGC
TTGGAGGGCT TGCGCGATTT TTTCAGCGTC GGCCTGTCAT GGCAGGGCAC TGGGCTGGGC
AACTTCAGTG TCGGGGGCGG CCAATCGCGC ACGCGTAATG GCCAGACCAG CAGCCAGGCA
AACCTGCGCT GGGGAGCGAC GTTGGGGCAG GTGTCATTGA ATGCTGGTGT GGAATGGAGC
CTCAGAGGAG CAGATGATCG AGGGCGTCTT CTTTACATGA GCGCTAGCGT GCCATTGGGC
ACCAATCGTC GTCTTGGTGC CTCGACCCGA GCTTCAGGTG ACCACTACCG TTCTTCATTC
AACCTGCGAG AACAGGTCAG CGATACGTTA GGTTATCGCC TGAGTGGCAG TCACGATAGC
CATGATCCGG CGCTGCTACC CAGTGTGGGG GTTTCCTGGC TGGCCCCCTT CAGCCAGGTG
CAGCTGGATT ACTCAAAGAC TGGCGATTCT GCACGAACCC TGGCAGCCAA CCTGCGCGGT
GGGGCCCTTG GGCATGCACA GGGCATCACG CTAGCACCTT ATTCCATTCA GGATACTTTC
GCGCTCATCG AAGTGGGTGA TCTTCACGGG GTGAAGGTCG ATACGCCCAG CGGCCCCGTA
TGGACCGATC GCCAAGGCCG AGCCATTGCC TCACGGATTA CCCCCTACGC AGACAATCGA
GTGCAGGTGC AGCCCCGAAG CCTGCCGCGC AGTGTCGATC TGGCCAACAG CCTTGGCATC
GTACGGGCAG GTCGAGGCGC GGTTTCCCAA TTGAGTTTCA TCGTCGAGCG GACCAGGCGC
GTGCTGTTGC AGACTTTGCA GGGCGACGGG CCGCCCTTGG CGGACAGTTC CATGGTAGTG
GATGCCAACG GAAGCTTCGT GACCATGGTG CAGGCCGGAG GCTTGATATT CCTGCATGAC
TTCCAAGAGG AAGAGCGCTA CCACGTGACC TCGCCAGACG GCTCTGGTTG TGCCCTTGAG
TTCACCCTCA GCGACAGCCC GGACCCGGAG CAATATTATG AAACGACCAC CGCACGCTGC
CATGCGATCT GA
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| Protein sequence | MALPWAFLFL ECRASDGLTF DLELLRQRGL SEELAAYFRD MPRFTPGNHI VSLTINGSRS
GTVQARFLND GSLCIDTGLL EAGGIRLPTA AASESQGSCI DLLSSYPQSQ IQADPQSASV
TMVVPAQALR PAAAGDDLSA YDSGGFAAMF NYDVSMLDTR FKDGSSRSWT ALTEPGLNLG
DWIVRSRQIA SLGQQASRLN ALEAYAQRTF ADQATVLQVG QIQMGNPVLS GVSVDGFQLF
SEQALGHLQQ RRVVQGIAKS QARVEIYQRN RLVYATVVPP GPFSIDSPAP VDAFAELEMV
IHEADGEERR LTLPASPMAA GLSGGYQFGI GQLRHSRAAS PWVLSAGWSG SVLDGLEVGG
GLIATDSYQA TGFALGAQPW TQAQMQWSLG YSQPLHQERG MQSQMTLNQQ FAGGWGAGLT
YGLQSQSYQD LQQALEPSGR LEGLRDFFSV GLSWQGTGLG NFSVGGGQSR TRNGQTSSQA
NLRWGATLGQ VSLNAGVEWS LRGADDRGRL LYMSASVPLG TNRRLGASTR ASGDHYRSSF
NLREQVSDTL GYRLSGSHDS HDPALLPSVG VSWLAPFSQV QLDYSKTGDS ARTLAANLRG
GALGHAQGIT LAPYSIQDTF ALIEVGDLHG VKVDTPSGPV WTDRQGRAIA SRITPYADNR
VQVQPRSLPR SVDLANSLGI VRAGRGAVSQ LSFIVERTRR VLLQTLQGDG PPLADSSMVV
DANGSFVTMV QAGGLIFLHD FQEEERYHVT SPDGSGCALE FTLSDSPDPE QYYETTTARC
HAI
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