| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1088 |
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| Symbol | |
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| ID | 5868847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1235948 |
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| End bp | 1236754 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546187 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001667332 |
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| Protein GI | 167032101 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.466236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCTG AAAAAGCATC ACCGGGGCTG CGCCTGGCGG CCTGGGGCGG GTTGCTGTTC
CTGCACTTCC CGATCCTGAT CATCTTTCTG TACGCCTTCA ACACCGAAGA CGCCGCGTTC
AGCTTCCCGC CCAAGGGCTT CACCCTGAAG TGGATTGGCG TGGCCTTCGC CCGGCCCGAT
GTGCTGGAGG CAATCAAGCT GTCACTGCAG GTGGCCTGCC TCGCCACGCT GATCGCGCTG
GTACTGGGCA CACTAGCCTC GGCTGCGCTG TACCGGCGCA GCTTTTTCGG CAAGGAGAGC
ATTTCGCTGA TGCTGATCCT GCCCATCGCC CTGCCCGGCA TCATCACCGG CATCGCCCTG
CTCTCGGCGT TCAAGACCTT GGGGATCGAG CCTGGTGTGT TCACCATCGT GGTCGGCCAC
GCCACGTTCT GCGTGGTGAT CGTCTACAAC AACGTGATCG CCCGCCTGCG GCGCACCTCG
CAGAGCCTGA TCGAAGCGTC GATGGACCTG GGCGCCGATG GCTGGCAGAC CTTCCGCTAC
ATCATCCTGC CCAACCTCGG TTCGGCGCTG CTGGCCGGCG GCATGCTGGC CTTTGCCCTG
TCGTTCGATG AAATCATCGT CACCACCTTC ACCGCCGGCC ACGAGCGCAC GCTGCCGATC
TGGCTGCTCA ACCAACTCAG CCGCCCGCGT GACGTACCGG TGACCAACGT GGTCGCCATG
CTGGTGATGC TGGTGACCAT GCTGCCAATC CTTGGCGCCT ATTACCTGAC CCGTGGCGGC
GAAAGCGTCG CGGGCAGTGG CAAATGA
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| Protein sequence | MHSEKASPGL RLAAWGGLLF LHFPILIIFL YAFNTEDAAF SFPPKGFTLK WIGVAFARPD
VLEAIKLSLQ VACLATLIAL VLGTLASAAL YRRSFFGKES ISLMLILPIA LPGIITGIAL
LSAFKTLGIE PGVFTIVVGH ATFCVVIVYN NVIARLRRTS QSLIEASMDL GADGWQTFRY
IILPNLGSAL LAGGMLAFAL SFDEIIVTTF TAGHERTLPI WLLNQLSRPR DVPVTNVVAM
LVMLVTMLPI LGAYYLTRGG ESVAGSGK
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