| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1065 |
|---|
| Symbol | |
|---|
| ID | 5868824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 1212646 |
|---|
| End bp | 1213455 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641546164 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_001667309 |
|---|
| Protein GI | 167032078 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTCCT CTCCCAGCCT CATCCCCAAC CTGATCGCTG CCGGCCTATA TATAGCTGCG
GCCATCTACC AGGGCTCGTA CCTGGCCCAG GGCCGCAAGG CCGACAAGCG CCTGCTTGGC
CTGCTGGGCG CCGTCGCGGT GCTGGCCCAG GCCGGCGCGC TGTTCTTCCA GTTGATCACC
CCGCTGGGCC TGAGCCTGGA CTTCTTCAGC GCCGCCAGCC TGATCGCCGT GGCCGTCATC
ACCCTGACCC TGCTGGCCTG CCTGCGCATA CCGGTAGAAA ACCTGCTGTT GTTGCTGTTC
CCGCTGGGCG CGGTGACAGC GTTGCTGGCG CAGTTCGCAC CACCCGGCAC GGTGCCACTG
ATAAACGAAG AACCGGGCAT TCTCGCCCAT ATCCTGTTGT CGATCCTGGC CTATGGGCTG
TTCACCATCG CGGTTTTCCA GTCACTGCTG TTGCTGCTGC AGGACCGCCA GTTGAAGAAC
AAGCACCCGT CCGGGCTTAT CCGCAACTTC CCACCGCTGC AAACCATGGA AAGCCTGCTG
TTCGGCTTTC TCTGGGCCGG CTGGTGCCTG CTGTCGCTTT CGTTGATCTC CGGCTGGCTG
TTCCTCGACA ACCTGTTCGC CCAGCACCTG GTGCACAAGA CGTTGCTGGC CTGTGTCGCC
TGGGTGGTGT TCAGCGTGCT GCTGTGGGGC CGTACCCGCC TGGGCTGGCG GGGCCACAAG
GCCATCCGCT GGACGCTGGC CGGTTTCTGC CTGCTGATGC TGGCCTATTT CGGCAGCAAG
CTGGTTCGCG AATTCATCTT GCATATCTGA
|
|---|
| Protein sequence | MVSSPSLIPN LIAAGLYIAA AIYQGSYLAQ GRKADKRLLG LLGAVAVLAQ AGALFFQLIT
PLGLSLDFFS AASLIAVAVI TLTLLACLRI PVENLLLLLF PLGAVTALLA QFAPPGTVPL
INEEPGILAH ILLSILAYGL FTIAVFQSLL LLLQDRQLKN KHPSGLIRNF PPLQTMESLL
FGFLWAGWCL LSLSLISGWL FLDNLFAQHL VHKTLLACVA WVVFSVLLWG RTRLGWRGHK
AIRWTLAGFC LLMLAYFGSK LVREFILHI
|
|---|
| |