Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1065 |
Symbol | |
ID | 5868824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1212646 |
End bp | 1213455 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546164 |
Product | cytochrome c assembly protein |
Protein accession | YP_001667309 |
Protein GI | 167032078 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTCCT CTCCCAGCCT CATCCCCAAC CTGATCGCTG CCGGCCTATA TATAGCTGCG GCCATCTACC AGGGCTCGTA CCTGGCCCAG GGCCGCAAGG CCGACAAGCG CCTGCTTGGC CTGCTGGGCG CCGTCGCGGT GCTGGCCCAG GCCGGCGCGC TGTTCTTCCA GTTGATCACC CCGCTGGGCC TGAGCCTGGA CTTCTTCAGC GCCGCCAGCC TGATCGCCGT GGCCGTCATC ACCCTGACCC TGCTGGCCTG CCTGCGCATA CCGGTAGAAA ACCTGCTGTT GTTGCTGTTC CCGCTGGGCG CGGTGACAGC GTTGCTGGCG CAGTTCGCAC CACCCGGCAC GGTGCCACTG ATAAACGAAG AACCGGGCAT TCTCGCCCAT ATCCTGTTGT CGATCCTGGC CTATGGGCTG TTCACCATCG CGGTTTTCCA GTCACTGCTG TTGCTGCTGC AGGACCGCCA GTTGAAGAAC AAGCACCCGT CCGGGCTTAT CCGCAACTTC CCACCGCTGC AAACCATGGA AAGCCTGCTG TTCGGCTTTC TCTGGGCCGG CTGGTGCCTG CTGTCGCTTT CGTTGATCTC CGGCTGGCTG TTCCTCGACA ACCTGTTCGC CCAGCACCTG GTGCACAAGA CGTTGCTGGC CTGTGTCGCC TGGGTGGTGT TCAGCGTGCT GCTGTGGGGC CGTACCCGCC TGGGCTGGCG GGGCCACAAG GCCATCCGCT GGACGCTGGC CGGTTTCTGC CTGCTGATGC TGGCCTATTT CGGCAGCAAG CTGGTTCGCG AATTCATCTT GCATATCTGA
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Protein sequence | MVSSPSLIPN LIAAGLYIAA AIYQGSYLAQ GRKADKRLLG LLGAVAVLAQ AGALFFQLIT PLGLSLDFFS AASLIAVAVI TLTLLACLRI PVENLLLLLF PLGAVTALLA QFAPPGTVPL INEEPGILAH ILLSILAYGL FTIAVFQSLL LLLQDRQLKN KHPSGLIRNF PPLQTMESLL FGFLWAGWCL LSLSLISGWL FLDNLFAQHL VHKTLLACVA WVVFSVLLWG RTRLGWRGHK AIRWTLAGFC LLMLAYFGSK LVREFILHI
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