| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1023 |
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| Symbol | |
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| ID | 5868783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1165883 |
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| End bp | 1167556 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546124 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001667269 |
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| Protein GI | 167032038 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC TCAAAGACCC TTCGAAGAAG TACCGCGCTT TCCCGACCAT CGACCTGCCT
GACCGCACCT GGCCGTCGAA GACCATCACC GAAGCACCTA TCTGGTGCAG CTCCGACCTG
CGTGATGGCA ACCAGTCGCT GATCGAGCCG ATGGATTCGG AGAAGAAACT GCGCTTCTGG
AAGACCTTGG TGCAGGTGGG CGTGAAGGAA ATCGAAGCCT CGTTCCCGTC TGCCTCGCAG
ACCGATTTCG ACTTCGTGCG CACCCTGATT CAGGACGGCC ACATCCCGGA CGACACCACC
ATCCAGGTGC TCACCCAAGC CCGTGAAGAC CTGATCGCCC GCACCTTCGA GTCGCTGCGC
GGTGCCAAGA AAGCCATCGT CCACCTGTAC AACGCCACCA GCCCGTCGTT CCGCCGCATC
GTCTTCAATC AGGACAAACA AGGCGTGAAG GACATCGCGG TGAACGCGGC CAAGCTGTTC
GTCAAATACG CTGCCCAGCA GCCAGAAACC CACTGGACCT TCCAGTACTC GCCAGAAACC
TTCAGCGCCA CCGAAATGGA ATTCGCCAAG GAAGTCTGCG ACGCGGTCAT CGAGGTGTGG
AACCCAACAC CTGAACACAA GATCATCCTC AACCTGCCGG CCACCGTGGA AGTGTCCACG
CCAAACATCT ACGCCGACCA GATCGAGTGG TTCTGCCGCA ACGTCAGCCG CCGCGACAGC
GTGATCATCA GCCTGCACTG CCACAACGAC CGTGGCACCG GCATCGCAGC CACCGAGCTG
GGCCTGATGG CCGGTGCCGA CCGCGCCGAA GGCTGCCTGT TCGGCAACGG CGAGCGTACC
GGTAACGTCG ACCTGGTGAC CTTGGCACTG AACCTCTACA CCCAGGGCAT CGACCCGCAG
CTGGACTTCT CCGACATCGA CGGCGTGCGC AAGGTGGTCG AAGAGTGCAA CCAGCTGCCA
GTGCACCCTC GCCACCCGTA TGTTGGCGAC CTGGTCCACA CCGCGTTCTC CGGCTCGCAC
CAGGATGCCA TCCGCAAGGG CTTCGCCAAG CAGCAGGAAG GCGAACGGTG GGAAGTGCCG
TACCTGCCGA TCGACCCGGC CGACATCGGC CGCAGCTACG AGGCGGTGAT CCGCGTCAAC
AGCCAGTCGG GCAAAGGCGG CATCACCTAC CTGCTCGAAC AGGAATATGG CATCAGCCTG
CCGCGCCGCA TGCAAATCGA GTTCAGCCAA GTGGTGCAAG GTGAAACCGA CCGCCTTGGC
CTGGAAATGA CCGCCCAGCA AATCTACAGC CTGCTGCACA AGGAATACCT CCAGGCCAAC
GCGCCATACG CATTGGTCAG CCATCGCCTG CAGGAAGAAA ACGGCCACAG CGCCGTGGAA
GTGGAAGTGG CCGGTGAAGG CGAAACCACC CTGCACTGGC GCGGCAAGGG CAATGGCGCC
CTGGAAGCAC TGGTGGCTGG CTTGCCGATT GCCGTGGAGA TCATGGACTA CAACGAGCAC
GCCATTGGTG CGGGCACCAA TGCCAAGGCA GCGGCCTACA TTGAACTGCG CGTGGCCGGT
GGCCGCCCGG TACATGGCGT AGGCATCGAT GAAAACATCA CCACCGCCAG CTTCAAGGCA
CTGTTCAGCG CGCTGAACCG CTCGCTGAGC CAGCAGGAGG CCAAGGCGGC CTGA
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| Protein sequence | MTMLKDPSKK YRAFPTIDLP DRTWPSKTIT EAPIWCSSDL RDGNQSLIEP MDSEKKLRFW
KTLVQVGVKE IEASFPSASQ TDFDFVRTLI QDGHIPDDTT IQVLTQARED LIARTFESLR
GAKKAIVHLY NATSPSFRRI VFNQDKQGVK DIAVNAAKLF VKYAAQQPET HWTFQYSPET
FSATEMEFAK EVCDAVIEVW NPTPEHKIIL NLPATVEVST PNIYADQIEW FCRNVSRRDS
VIISLHCHND RGTGIAATEL GLMAGADRAE GCLFGNGERT GNVDLVTLAL NLYTQGIDPQ
LDFSDIDGVR KVVEECNQLP VHPRHPYVGD LVHTAFSGSH QDAIRKGFAK QQEGERWEVP
YLPIDPADIG RSYEAVIRVN SQSGKGGITY LLEQEYGISL PRRMQIEFSQ VVQGETDRLG
LEMTAQQIYS LLHKEYLQAN APYALVSHRL QEENGHSAVE VEVAGEGETT LHWRGKGNGA
LEALVAGLPI AVEIMDYNEH AIGAGTNAKA AAYIELRVAG GRPVHGVGID ENITTASFKA
LFSALNRSLS QQEAKAA
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