Gene PputGB1_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0935 
Symbol 
ID5868695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1073204 
End bp1074229 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content65% 
IMG OID641546036 
ProductCaCA family Na(+)/Ca(+) antiporter 
Protein accessionYP_001667181 
Protein GI167031950 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGATCG GCGGCGCCGA GCTACTGGTG CGCGCCGCGT TGCGCCTGGC ACAGCGCCTG 
CACGTGCGCC CGCTGATCAT CGGCCTGAGC CTGGTGGCGT TCGGCAGTAC CGCGCCACAA
TTGACCGTGA GCCTGCAGGC TGCCTACCAG GGAGCGCCCG ATGTGGCGGT CGGCAGCGTG
GTCGGCAGCA ACATCTTCAA CATCCTGGTC ATTCTTGGCC TGGCCGCGCT GATCATCCCG
CTGCGCGTGT CACGCCAACT GGTGCGCCTG GACATTCCGT TGATGATCAT CGCCAGCGGG
CTGGTGTACG CATTGTCCAC CAACGGCCAC CTGGGCCGAG TGGAAGGGGC ACTGCTACTG
CTGGGCCTGG CTGGTTACCT GGCAATGCTC TGGCACCAGT CCCGCCACTA TGCACGCACT
TACCCCGCCC CGGATGCTGC CAGGTCCAGC GCCGGGCGCT TCTGGTCAGG CACGCTGCTG
CAGGTGTTGG TCGGCCTTGG CCTGCTGAGC CTGGCGGGCC ACTTACTGCT GGAAGCCGCC
GTCGAGGTGG CTACCGACCT GGGCCTGTCC GAGCGTATCA TCGGCCTGAC AGTCGTCGCC
GTCTGCACCT CCCTGCCGGA GCTGGCCGCA GCGCTGATTG CCGCCCTGCG TGGCGAACGG
GAGATTGCCG TGGGCACGGT CATCGGCAGC AACCTGTTCA ACCTGCTGGC CGTGCTGGGC
CTGACCGCGC TGATCGCCCC AGAGCCGCTG TCGATCTCGC CCAACGCGCT GTCTTTCGAC
TTGCCTGTAA TGCTCGGCGT TGCCCTATTG AGCCTGCCAG TGTTCTATTC CGGCTACCGC
ATCACCCGCG CCGAAGGCCT GGTGTTTCTT TGCCTGTACC TGGTCTATGG CCTGCATGTG
GCAGCCTTTA CCATGGGCAT GCCGCTGGCC GGCCGCCTGG AACGATTGAT GCTGTTCTAT
GTACTGCCAG TGCTCGCCAT GGTGTTGCTG TACACCACCG TACGTGCCTG GCGCCGCCAA
CACTAA
 
Protein sequence
MLIGGAELLV RAALRLAQRL HVRPLIIGLS LVAFGSTAPQ LTVSLQAAYQ GAPDVAVGSV 
VGSNIFNILV ILGLAALIIP LRVSRQLVRL DIPLMIIASG LVYALSTNGH LGRVEGALLL
LGLAGYLAML WHQSRHYART YPAPDAARSS AGRFWSGTLL QVLVGLGLLS LAGHLLLEAA
VEVATDLGLS ERIIGLTVVA VCTSLPELAA ALIAALRGER EIAVGTVIGS NLFNLLAVLG
LTALIAPEPL SISPNALSFD LPVMLGVALL SLPVFYSGYR ITRAEGLVFL CLYLVYGLHV
AAFTMGMPLA GRLERLMLFY VLPVLAMVLL YTTVRAWRRQ H