Gene PputGB1_0889 details

Gene Information

• Locus tag: PputGB1_0889
• Symbol: hscA
• ID: 5868649
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida GB-1
• Kingdom: Bacteria
• Replicon accession: NC_010322
• Strand: +
• Start bp: 1019878
• End bp: 1021740
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 641545990
• Product: chaperone protein HscA
• Protein accession: YP_001667135
• Protein GI: 167031904
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.00000727661
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCCCTAC TGCAGATTGC CGAACCCGGT CAAAGCCCTC AGCCGCACCA GCGCCGCCTG 
GCGGTGGGGA TCGACCTGGG TACCACCAAC TCTCTGGTCG CTGCATTGCG CAGCGGTCGT 
AGCGAGCCCC TGCCTGACGC GCAGGGTAAC GTCATTCTGC CGTCCGCGGT GCGCTACCTC 
GAAGGGCGCA ACGAAGTGGG GCAGGCAGCG CGTGATGCCG CTTCCAGCGA CCCGTTGAAC 
ACCGTGCTGT CGGTCAAGCG CCTGATGGGG CGCGGCCTGG CCGACGTCAA GCAACTGGGC 
GAGCAGCTGC CGTACCGCTT TGTTGGTGGT GAGTCGCACA TGCCGTTCAT CGACACTGTC 
CAAGGGCCGA AAAGCCCGGT GGAAGTGTCT GCCGATATCC TCAAGGTGCT GCGCGAGCGC 
GCCGAAGCGA CCTTGGGTGG CGAACTGGTA GGTGCGGTGA TTACCGTGCC CGCCTATTTC 
GATGACGCCC AGCGCCAGGC CACCAAGGAC GCTGCGCGCC TGGCGGGGCT GAACGTGCTG 
CGCCTGCTCA ACGAGCCCAC TGCGGCTGCA GTGGCCTACG GCCTGGACCA GAACGCCGAA 
GGCGTGGTGG CCATCTATGA CCTGGGCGGC GGCACCTTCG ATATTTCCAT CCTGCGCCTG 
ACCGCTGGTG TCTTCGAAGT GCTTGCCACC GGTGGTGATA CCGCCTTGGG TGGCGACGAT 
TTCGACCACG CCATTGCCGG CTGGATCATC GAGGAGGCTG GCTTGTCGTC CGACTTGGAC 
CCAGCTACCC AGCGCGCATT GTTGCAAACC GCCTGCGCGG CCAAGGAAGC GTTGACTGAC 
ACCGATGTGG TCAGTGTCAG CCATGGCGCC TGGCAGGGTG AGCTGAGCCG CGCCGCCTTC 
GAAGCCATGA TCGAACCGCT GGTTGCCCGC AGCCTCAAGG CTTGCCGCCG CGCCGTGCGC 
GACAGTGGCG TCGAGCTGGA AGAAGTCAGC GCCGTGGTCA TGGTCGGTGG TTCGACTCGC 
GTCCCGCGTG TGCGTGAAGC CGTGGGTGCG TTGTTCGGGC GCACCCCGTT GACGTCGATC 
GACCCCGACC AGGTGGTGGC CATCGGCGCC GCCATCCAGG CCGACACCCT GGCTGGCAAC 
CGCCGTGAAG GTGGTGAACT GCTGCTGCTC GATGTCATCC CGTTGTCGCT TGGCCTTGAA 
ACCATGGGCG GGTTGATGGA GAAGGTGATC CCGCGCAACA CCACCATTCC GGTGGCCCGC 
GCCCAGGAGT TCACCACGTA CAAGGATGGC CAGTCGGCCA TGATGATCCA TGTGCTGCAG 
GGCGAGCGCG AGCTGATCAG CGACTGCCGC TCGCTGGCCC GCTTCGAGCT GCGTGGTATT 
CCGGCCATGG TGGCCGGCGC GGCAAAAATT CGCGTTACCT TCCAGGTGGA CGCCGATGGC 
CTGCTCAGTG TCGCCGCCCG CGAGCTGGGT TCGGGCGTGG AAGCCAGTAT CCAGGTCAAG 
CCGTCCTATG GCCTGACCGA CGGCGAAATC GCCCGCATGC TGAAAGACTC CTTCGAGCAT 
GCCGGTTCCG ACAAGCACGC CCGCCAGTTG CGCGAGCACC AGGTGGACGG CGAGCGCCTG 
CTCGAAGCGG TACAGGGCGC CCTGGACGCC GATGGCGAAC GCCTGCTCAG CAGTGACGAG 
CGCGACGCCA TTGCATTCCA GATGCAAGAA CTACGTGATT TGCTGGCCGG CACCGATGGC 
GCTGCCATCG AGCAACAGAC CAAGCGTCTG TCGCAGGTGA CCGATGCTTT TGCCGCCCGT 
CGCCTTGATT CGACGGTCAA AGCCGCACTG GCCGGGCGCA ACCTGAATGA GATCGAGGAG 
TAA 

 

Protein sequence

MALLQIAEPG QSPQPHQRRL AVGIDLGTTN SLVAALRSGR SEPLPDAQGN VILPSAVRYL 
EGRNEVGQAA RDAASSDPLN TVLSVKRLMG RGLADVKQLG EQLPYRFVGG ESHMPFIDTV 
QGPKSPVEVS ADILKVLRER AEATLGGELV GAVITVPAYF DDAQRQATKD AARLAGLNVL 
RLLNEPTAAA VAYGLDQNAE GVVAIYDLGG GTFDISILRL TAGVFEVLAT GGDTALGGDD 
FDHAIAGWII EEAGLSSDLD PATQRALLQT ACAAKEALTD TDVVSVSHGA WQGELSRAAF 
EAMIEPLVAR SLKACRRAVR DSGVELEEVS AVVMVGGSTR VPRVREAVGA LFGRTPLTSI 
DPDQVVAIGA AIQADTLAGN RREGGELLLL DVIPLSLGLE TMGGLMEKVI PRNTTIPVAR 
AQEFTTYKDG QSAMMIHVLQ GERELISDCR SLARFELRGI PAMVAGAAKI RVTFQVDADG 
LLSVAARELG SGVEASIQVK PSYGLTDGEI ARMLKDSFEH AGSDKHARQL REHQVDGERL 
LEAVQGALDA DGERLLSSDE RDAIAFQMQE LRDLLAGTDG AAIEQQTKRL SQVTDAFAAR 
RLDSTVKAAL AGRNLNEIEE