| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0853 |
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| Symbol | |
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| ID | 5868612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 985324 |
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| End bp | 986211 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545953 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001667099 |
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| Protein GI | 167031868 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTA AGCACTTTAT CCAAATCACC AAACCGGGGA TCATTTTCGG TAACGTGCTT
TCCGTGGCAG GCGGTTTCTT CCTTGCCTCG AAGGGCCATG TGGACTTCGC CCTGTTCCTG
GCGGTGGTGA TCGGTACTTC GCTGGTGGTC GCGTCCGGAT GCGTGTTCAA CAACTGCATC
GACCGTGACA TCGACCACAA GATGGAGCGC ACCAAGAACC GCGTCATGGT GCAGGGCGGC
ATGTCGCTGC CCCTCGCGCT GATCTACGCC ACCCTGCTCG GGGTGGCGGG TTTCAGCTTG
CTGTATGTTC AGGCCAACCC GCTGTCGGCG TTCTGCGCGC TGATCGGCTT CATCGTCTAC
GTCGGTTTCT ACAGCCTGTG GCTGAAGCGT AAATCGGTGC ACGGCACCTT GGTCGGCAGC
CTGTCCGGTG CCATGCCTCC GGTGATCGGC TACTGCGCCG TCAGCAACAG CTTCGACCTG
GCTGCGGTAA CCCTGCTGGT GATGTTCAGC CTGTGGCAGA TGCCGCACAG CTTTGCCATC
GCGATCTTCC GCTTCAAGGA TTACAGTGCT GCCAACATTC CGGTTCTGCC GGTGGCGCGC
GGTGTTCTTG CGGCGAAGAA GCAGATCGTG CTGTACGTGC TGGCCTTCGT GCTCGCCACC
TTGATGCTTA CCCTCGGCGG TTACGCCGGC CTCGGCTACC TGGCCGTGGC GGCTGCCATG
GGCCTGTACT GGCTGTACAT GGCTTGGGGT GGCTACAAGG CCGAGGACGA CAGCAAGTGG
GCCCGTAAGG TATTCGGCTT CTCCATCCTC ACCGTCACTG CCCTGAGCGT GATGATGGGT
GTGGACAGCC AGACCGCTGC GGACGTGCTG ATGACTTACG CACGCTGA
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| Protein sequence | MSVKHFIQIT KPGIIFGNVL SVAGGFFLAS KGHVDFALFL AVVIGTSLVV ASGCVFNNCI
DRDIDHKMER TKNRVMVQGG MSLPLALIYA TLLGVAGFSL LYVQANPLSA FCALIGFIVY
VGFYSLWLKR KSVHGTLVGS LSGAMPPVIG YCAVSNSFDL AAVTLLVMFS LWQMPHSFAI
AIFRFKDYSA ANIPVLPVAR GVLAAKKQIV LYVLAFVLAT LMLTLGGYAG LGYLAVAAAM
GLYWLYMAWG GYKAEDDSKW ARKVFGFSIL TVTALSVMMG VDSQTAADVL MTYAR
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