Gene PputGB1_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0812 
Symbol 
ID5868571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp920622 
End bp921344 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID641545912 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001667058 
Protein GI167031827 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACCA TGCGTCGTCT GATTATCGTC GCAACTGCCG CTGCCCTGAT GACTGGCTGT 
GCCAGCCAGA ATCCTTACGA CAACCAGGGT CAGGCGCAGG GCTCCACTGG GATGAGCAAG
ACCGCCAAGT ACGGCGGCCT GGGCGCGCTG GCCGGCGCCA TCGCCGGTGC CGCCATCGAC
CACAACAACC GTGGCAAGGG TGCGCTGATC GGTGCTGCCG CAGTGGGTGC CGCCGCCGCC
GGTTATGGCT ATTACGCCGA CAAGCAAGAG GCCGAACTGC GCGCGCAAAT GGCCAACACT
GGCGTGGAAG TGCAGCGCCA GGGTGACCAG ATCAAACTGA TCATGCCGGG CAACATCACC
TTCGCTACCG ACTCGGCCAA CATCGCGCCA AGCTTCTACT CGCCGCTGAA CAACCTGGCG
GGCTCGTTCA AGCAGTTCAA CCAGAACACC ATCGAAGTGG TCGGCTTTAC CGACAGCACC
GGCAGCCGCC AGCACAACAT GGACCTGTCC CAGCGCCGCG CGCAGGCAGT CAGCACCTAC
CTGACCTCGC AGGGTGTGGA TGCCTCGCGC ATCTCGGTAC GTGGCATGGG CCCGGACCAG
CCGATCGCCA GCAACGCCGA CGCCAATGGC CGTGCGCAGA ACCGCCGCGT GGAAGTGAAC
CTGAAGCCGA TTCCGGGGCA GCAGTATGAC CAGCAGCAAG GTCAGGTTCA GCAGTATCCC
TGA
 
Protein sequence
MFTMRRLIIV ATAAALMTGC ASQNPYDNQG QAQGSTGMSK TAKYGGLGAL AGAIAGAAID 
HNNRGKGALI GAAAVGAAAA GYGYYADKQE AELRAQMANT GVEVQRQGDQ IKLIMPGNIT
FATDSANIAP SFYSPLNNLA GSFKQFNQNT IEVVGFTDST GSRQHNMDLS QRRAQAVSTY
LTSQGVDASR ISVRGMGPDQ PIASNADANG RAQNRRVEVN LKPIPGQQYD QQQGQVQQYP