| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0808 |
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| Symbol | |
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| ID | 5868567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 914396 |
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| End bp | 917113 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641545908 |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_001667054 |
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| Protein GI | 167031823 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATC TGTCCCGTAC GCATGGATTC GCGAGTCAGG CCCTGGGCCT GCTGGACGGG
CGTTTCTTCC GGCCTCCGTT GCCGGACGGC CATGTGCCGC GCCAGCGCCT GTGTCAGCGT
CTGCACGCCG GCCTGGGCGG GCGGCTGCTG CTGGTCAATG CCCCGGCAGG TTTCGGCAAA
AGCTCCCTGG CCATCGAATT TTCCGAAGCG CTGCCCGAAC ACTGGCGCAG CTTGTGGCTA
GGCCTGAGCC AGCGCGACGC CGACCCTGGC CGCTTCCTTG AACGCCTGCT CGAAGGCCTG
CAGCAGTACT GCCCAGCACT GGGCGGCCAG GCCATGGGGC TGCTGAAAAT GCGCCAGCGC
CACCAGCCGT TCGCCTTCGA AGAGTGGCTC GACGGCCTGC TCGACGAGCT GGCGCTGTAC
CTGCAAGCCG ATACGCCGCT GCTGCTGGTG CTGGACGACT ATCACCTGGC CCAGGGGCCG
GTGCTTGACC GCTGCCTGCA GTTCTTCCTC AATCACCTGC CCCCCGGCCT TGTGTTGCTG
GTTACCAGCC GCCAGCGGCC AGACTGGCAC CTGGCGCGCC TGCGCCTGTC ACGGCAGCTG
GTCGAGCTCA ACGAGCAGGA CCTGCGCCTC ACCGCGGATG AGGCGCTGGC AGTGATTGGC
CGCCAGCCCA CGGGCCTGCG CGGTCAGGCC CTGGACAACC TTATTCAGCG CAGCGACGGC
TGGGTGGCCG GGTTGCGCTT CTGGCAGCTG GCGGCCAGCG ACAGCGCTGA CGAGCAAGCC
TTGCCCCAGG CGCTGCATGG CGGCGAGGGC CTGATCCGCG ACTACTTGCT CGAAGAAGTC
ATCGACATGC TGCCCGTGGA CGTGCAGGCC TTCTTGTACG AAACCGCCTG CCAGGAGCGT
TTCTGCGCCC CGCTTTGCGA TGCGCTGCGG GGCCGCCACG ACAGTGCCGC GATCCTGCGC
TTCCTGCAGG CGCATCAGGT GTTCCTGGTG CCGCTGGACG AGCATGGCCA CTGGTTCCGC
TATCACCACT TGTTCTCCGA CCTGTTGCGC AGCCGCCAGG CCAGCGAGCC GCTAGCTGGC
CTGCACCTAC GGGCCTGCCG TTGGTTCGAA ACCCAGGGCC TGCTGGACGA AGCTGTGGAG
CAGGCCTTGC GTGCCGGCCA CCTGGATGTC GCCGCAGACC TGGTGCAGAG CCTGTCCGAG
GAGCAACTGC TGGCCGAACA GAACGTCGGT ATGTTGCTGC GCTGGAAGAT GGACCTGCCC
GACAGCCTGC TGATCAGCAC GCCACGGTTG ATCGTGCTGT ACAGCTGGGC GTTGGGCCTG
GCTTGCCAGC TGGACGCAGC CGAGGAACTG GCCGGCTACC TCAGCCGTTT TCTACCCGCG
CCTTCGGCAA CCGCGCAAAA GTCGATGCTG GCCCAGTGGC TGGCGCTGAG TGGGGTCATT
GCCCGTGGCC GTGGCGACCG CGAACGCACC CTGGCCTATT GCGGCGAGGC GCTACAGAGC
CTGCCGAGCA AGCGTTATGG CCAACGCCTG GTGTGTTTGT CGACGCTGTC CAACCTGGCC
ATTGCCGATG GCGACTTCTG GCGGGCCCGA GGCTGGAACC GCGAAGCCCT GGAGCTGGCC
CAACGGGTCG GCAACCCGTT GTTCGAGGCC CTGGCCCATT ACGACCGGGC GCGAGTGCTG
CACGCCCGTG GCGAGGTGCT GCGCGCACTG GACGAAGTGC GCCAGGGCCT GCAACGCCTG
CAGGGGCTTT CGGCGCAGCG GCTGTATGCC GTGCGTGCGC GCCTGACGCT TTACGAAGGC
TACCTGCTGG TCTCACGCCT GCAGCCGGCC CAGGGCCGAG CACGCTTGCG TGCAGGGCTG
GGCGAGGCGC GGGCGTGCCG AGACATCAGT GTGCTCATCG GTCATTGCGT GATTGCCACG
CTCGATGGCC GGGAAGGGCA CTTTGCCGAA GCCTTTGCCG AATTGGCCGA GGCCGAGCGC
CTGATGCATA TCTGGGACGT GCCCCCGGTC TATTACCTGG CCATGATTAC CCTGGTCAAA
TGCGAACTGT GGCTGGCCCA AGGGCGAACC GACCTGGCAG AGTCCTGGCT GCTGCGTCTG
GGCCAGACCT ACGGTGGCGA GCAACCGGCA GCAGCACCGG AGTTCCACCC GCTGCTGCCG
TTGCATATTG CGTTGCAGCA GGCTTTGCTC GAGCGCATCC AGTTGCGTGG CGAGGATGCC
GAGCAACGCC TGGCAAGCCT GGTAGCGCGT GGCCAGGCCA GTGGCGGCAT GATGCTCACC
GTCAGTGCCC TTTGCCAATG GCTTTCCCAA CTGCTGGACG AAGGCAGGGA AGGGCAGGCC
GCGCAGTTGC TGCCAGGTTT GCTGGAGGCA GCCCATGGCG GTGTGCTGCA ACCGTTCCAG
CCACTTCTGG AAAAGCACCC GCAATGGCTT CATGAGCAAC TGCAGCCAGC GGCCGCTTGC
CCGGTTCAAG CCGAACTGCT CAAGCACCTG CCGCCAGTGC CCACCGCCAG CACAGGCACC
GGCGAGGCGC TGAGCGGCCG CGAACTGGCC GTGCTCGAAC TGATTGCCCA GGGCTGTTCC
AACCAGCAGA TCAGCGAGCG GCTGTTCATT TCCTTGCACA CCGTGAAGAC CCACGCCAGC
CACATCAACA GCAAGTTGGG GGTTGAGCGA CGCACCCAGG CGGTGGCAAA GGCAAAAACG
CTGGGGTTGC TGGCGTGA
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| Protein sequence | MTDLSRTHGF ASQALGLLDG RFFRPPLPDG HVPRQRLCQR LHAGLGGRLL LVNAPAGFGK
SSLAIEFSEA LPEHWRSLWL GLSQRDADPG RFLERLLEGL QQYCPALGGQ AMGLLKMRQR
HQPFAFEEWL DGLLDELALY LQADTPLLLV LDDYHLAQGP VLDRCLQFFL NHLPPGLVLL
VTSRQRPDWH LARLRLSRQL VELNEQDLRL TADEALAVIG RQPTGLRGQA LDNLIQRSDG
WVAGLRFWQL AASDSADEQA LPQALHGGEG LIRDYLLEEV IDMLPVDVQA FLYETACQER
FCAPLCDALR GRHDSAAILR FLQAHQVFLV PLDEHGHWFR YHHLFSDLLR SRQASEPLAG
LHLRACRWFE TQGLLDEAVE QALRAGHLDV AADLVQSLSE EQLLAEQNVG MLLRWKMDLP
DSLLISTPRL IVLYSWALGL ACQLDAAEEL AGYLSRFLPA PSATAQKSML AQWLALSGVI
ARGRGDRERT LAYCGEALQS LPSKRYGQRL VCLSTLSNLA IADGDFWRAR GWNREALELA
QRVGNPLFEA LAHYDRARVL HARGEVLRAL DEVRQGLQRL QGLSAQRLYA VRARLTLYEG
YLLVSRLQPA QGRARLRAGL GEARACRDIS VLIGHCVIAT LDGREGHFAE AFAELAEAER
LMHIWDVPPV YYLAMITLVK CELWLAQGRT DLAESWLLRL GQTYGGEQPA AAPEFHPLLP
LHIALQQALL ERIQLRGEDA EQRLASLVAR GQASGGMMLT VSALCQWLSQ LLDEGREGQA
AQLLPGLLEA AHGGVLQPFQ PLLEKHPQWL HEQLQPAAAC PVQAELLKHL PPVPTASTGT
GEALSGRELA VLELIAQGCS NQQISERLFI SLHTVKTHAS HINSKLGVER RTQAVAKAKT
LGLLA
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