| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0652 |
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| Symbol | ispH |
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| ID | 5868403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 747513 |
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| End bp | 748460 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545745 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001666899 |
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| Protein GI | 167031668 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.259845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCA AACTCGCCAA CCCTCGCGGC TTTTGCGCGG GGGTCGACCG GGCGATCGAG
ATCGTCAACC GCGCGCTGGA AGTCTTCGGC CCGCCGATCT ATGTGCGCCA CGAAGTGGTG
CACAACAAGT TCGTGGTGGA AGACCTGCGC AACCGTGGCG CCATCTTTGT CGAAGAGCTG
GACCAGGTAC CGGACGATGT CATCGTCATC TTCAGTGCCC ACGGTGTTTC CCAGGCCGTG
CGCCAGGAAG CGGCTGGCCG TGGCCTGAAA GTGTTCGATG CCACCTGCCC GCTGGTGACC
AAGGTGCACA TCGAAGTGGC CAAGTACAGC CGCGATGGCC GTGAGTGCAT TCTCATCGGC
CACGAAGGGC ACCCGGAAGT CGAAGGCACC ATGGGCCAGT ACGACGCCAG CAACGGTGGC
GCCATCTACC TTGTCGAGGA CGAGGAAGAT GTTGCCAACC TGCAGGTGCG CGACCCGGAC
CACCTGGCCT TCGTCACCCA GACCACGCTG TCGATGGACG ACACCAGTCG CGTCATCGAC
GCCCTGCGTG CACGCTTTCC GAACATCGGT GGCCCGCGCA AGGACGACAT CTGCTACGCC
ACCCAAAACC GCCAGGACGC CGTCAAGCAA CTGGCAGGCG AGAGTGACGT GGTGCTGGTG
GTCGGCAGCC CGAACAGCTC CAACTCCAAC CGCCTGCGCG AGCTGGCCGA GCGCATGGGC
ACTCCGGCTT ACCTGATTGA TGGTGCCGAG GACCTGCAAC GCGGCTGGTT CGACCAGGCC
GCGCGTATCG GCATCACTGC CGGTGCTTCG GCCCCCGAAG TGCTGGTGCG TGGCGTGATC
GAGCAACTCA AGGCTTGGGG CGCCACGGGC GCTGAAGAGC TGGATGGGCG GGAGGAGAAC
ATCACCTTCT CGATGCCTAA AGAGCTGCGG GTTCGGTCGC TGATCTGA
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| Protein sequence | MQIKLANPRG FCAGVDRAIE IVNRALEVFG PPIYVRHEVV HNKFVVEDLR NRGAIFVEEL
DQVPDDVIVI FSAHGVSQAV RQEAAGRGLK VFDATCPLVT KVHIEVAKYS RDGRECILIG
HEGHPEVEGT MGQYDASNGG AIYLVEDEED VANLQVRDPD HLAFVTQTTL SMDDTSRVID
ALRARFPNIG GPRKDDICYA TQNRQDAVKQ LAGESDVVLV VGSPNSSNSN RLRELAERMG
TPAYLIDGAE DLQRGWFDQA ARIGITAGAS APEVLVRGVI EQLKAWGATG AEELDGREEN
ITFSMPKELR VRSLI
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