| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0580 |
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| Symbol | |
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| ID | 5868326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 654161 |
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| End bp | 656338 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545668 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001666827 |
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| Protein GI | 167031596 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGTT TCAAAGGTGT GGGGAGCCCG CGACGGGTGC GGGGCTGGCT GGTACTGGGG
CTGCTGGCGC CATTTTCGTT GTCGGCACTG GCTGAAACGG TAGCGACTCA GGCGGCAGCC
GAGGATGCCT CGCTCGACCT GCCAGCATTG ACCATCGAGG GCAACCGCCT TTACGACATG
CTGCCATCGG AAGAAACCGG GGGCTACAGC GTCGATGCCG CTACAGTGGG CACCAAGACG
CCAGCAGCGC TAAAGGACAT TCCCCAGTCC ATCACCGTCT ACACCCAGGA CTACGTCAAG
GACCGCCAGT TCGTGCACCT GGATGACCTG GCCAAGTACA CCGCCGGCCT GCGCACCCTG
ACCAACGATA GCGGCCGCTC GTCAATCTAC GCCCGTGGCT ACGAGTACAG CGAATTCAAC
ATCGACGGCC TGCCGGCCCC CATGGCCAGT ATCTTCGGCA CTGTGCCGTC GCTGGCGGCG
TTCGACCGAG TCGAAATCAT GCGTGGCCCG GCTGGGCTGT TCAGCAGTAC CAGTGAACTG
GGTGGCATCG TCAACATGGT GCGCAAGCGC CCGACGGCCG AATTCCAGGG CCACATCGAA
GGCAGCTACG GCACCTGGGA CACCAACCAC GAGGAAATCG ACCTGAGCGG GCCGCTGGAT
GACGCCGGCC GCGTGCGCGG GCGCTTCATC GCATCCCGTG ACGACACCAA TGGCGAAGTC
GATTACAACG CCAACACCAG CAACAGCTAC TACGGTGCGC TGGACATCGA CCTGGACGAG
GCCACCACGC TGTCGTTCGG GCTGATGCAC GAAGTGAAGA ACATCACCCC GCACAACGGC
TACCCGGCCA CGTTGTCCGG TGAAGTGCCC GACTTCAGCC ATTCGCGTTT CCTGGGGGCC
GACTGGAACT ACTTCGACGG CAAGACCACC GACCTGGTCG CCGAACTGAC CCACCGCTTC
GATAACGGTG GCTACGGCCG TGTCGCTGCC CGTGGCTCGC ACCGCGATAC AAATTACCTG
TATGCCTTCA CTGCGACCAA CGCCACTACC GGTGCCAACT CCGAACGCGC CAGCGCCCGC
GATTTCACCC AGGACACCTA CTCGCTGGAC GCCAGCTACA GCCAGCCGTT CGAAACATTC
GGCCAGGTCA GCGAGTTCGT GGTCGGCAGC GACTATAAGA ACTACGATAC CGAGTACCTC
AACGGCACCA CCAACCTGGG TGCCATCAAC GTCAACACCT ATTCGCCGAA GCAGTTCGCC
AAGCCGTCGC CCAACTACAG CACCGAAACC GGCATGCAGG AAGAGGAATA CGGGCTGTAC
TCCAAGGTTA CGTTCCGCCC GATCGATCGC CTGGCGCTGA TCGCCGGTGG CCGTTTCAGC
TGGTATCGCG GTGACTTCTA CACCACTACC CTGAGCAGCG GCGCCACCAC CAATGACAGC
AAACGCGTGG ACGGTCACTT CACTCCATAT GGCGGCCTGG TCTACGACCT GACCGATAAC
CACGCGTTGT ATGCCAGCTA CTCGCAGGTG TTCAAGCCGC AGTCCGACAC TGACAGCAAC
GGCCGCGTGC TGAAGCCGCG TGAAGGCGAG CAGTATGAGC TCGGCCTGAA GAGCAGCTAC
TTTGGCGGCG ACCTGAATAC CCGGTTGTCG GTGTTCCGGC TGACCGACAA GAACCGCGCC
ACCACGCTGT ACGACGCTGA TGGCGTAGCA ACTACCGACT CCGTTGCAGC CGGCAAGACA
CGTGTGAAGG GCGCGGAAGT AGAAGTGAGC GGCAAGCTGA CGGCAAATTG GGAACTGCTG
GCCGGCTACA CCTGGATGGA AACCGAAACC GTCAAGGGTG ACGCCGAAAC CACCTTCTTC
ATCATGCCGC GCAACCAGGC ATCACTGTGG AGCAAATACA CCATCAACCA AGGGCCGCTG
ACTGGCCTGG CCGTGGGTGG CGGCATATCG GCGATGAGCA ACTTCTATTC CGAAAATGGC
GGTGTGCGTA TCGATGCACC GGGCTATGCC ACAGTGGATG CGATGCTGTC GTACCCGGTT
ACCTCGAAGC TGACGGCCAC CTTCAACGTC AACAACCTGT TCGATCGGGA CTACCTGTCG
CGGGTGGGGT CAACTTCGAC ATTCAACTTT TACGGGCCGT CGCGCAGCAT GATGGTTGGC
GCGCGGTATG ACTTCTGA
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| Protein sequence | MNGFKGVGSP RRVRGWLVLG LLAPFSLSAL AETVATQAAA EDASLDLPAL TIEGNRLYDM
LPSEETGGYS VDAATVGTKT PAALKDIPQS ITVYTQDYVK DRQFVHLDDL AKYTAGLRTL
TNDSGRSSIY ARGYEYSEFN IDGLPAPMAS IFGTVPSLAA FDRVEIMRGP AGLFSSTSEL
GGIVNMVRKR PTAEFQGHIE GSYGTWDTNH EEIDLSGPLD DAGRVRGRFI ASRDDTNGEV
DYNANTSNSY YGALDIDLDE ATTLSFGLMH EVKNITPHNG YPATLSGEVP DFSHSRFLGA
DWNYFDGKTT DLVAELTHRF DNGGYGRVAA RGSHRDTNYL YAFTATNATT GANSERASAR
DFTQDTYSLD ASYSQPFETF GQVSEFVVGS DYKNYDTEYL NGTTNLGAIN VNTYSPKQFA
KPSPNYSTET GMQEEEYGLY SKVTFRPIDR LALIAGGRFS WYRGDFYTTT LSSGATTNDS
KRVDGHFTPY GGLVYDLTDN HALYASYSQV FKPQSDTDSN GRVLKPREGE QYELGLKSSY
FGGDLNTRLS VFRLTDKNRA TTLYDADGVA TTDSVAAGKT RVKGAEVEVS GKLTANWELL
AGYTWMETET VKGDAETTFF IMPRNQASLW SKYTINQGPL TGLAVGGGIS AMSNFYSENG
GVRIDAPGYA TVDAMLSYPV TSKLTATFNV NNLFDRDYLS RVGSTSTFNF YGPSRSMMVG
ARYDF
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