Gene PputGB1_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0540 
Symbol 
ID5868286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp619237 
End bp620046 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID641545628 
ProductCro/CI family transcriptional regulator 
Protein accessionYP_001666787 
Protein GI167031556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.781184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC ATTTCGCTAC CAACCTCAAG TTGGCCTGCA GCCACTACCG CTCTATTTCC 
GAAGTTTGCC GCCAGCTGTC GATCAACCGC GCACAGTTCA ACAAGTACCT GAGCGGGCAG
AGCCGTCCGA CGGCTTTCAA CCTGAAGCGC ATCGGCGATT TCTTCGGCGT TGAGGATTAC
GAGTTGAACC TGCCGGCCGA GCAGTTTGCC CGGCTGATTG GCGCACGGGT GTCGACCCTG
GCCGAGCAGC CCAGCGACCC GATCAGTGAA CTGTTCCGCC CGCTGCACGA TCATGCCGGC
AACCTGTCGC GCTATTGCGG TTACTACTTC GAGTATTCCA ACTGCATGTC GGTGCCGGGC
ACGATCCTGG TGTCACTGGT GCACCTGTGG GAGGAGCGTG GCCGCTTCCT GTTCGAGCGC
CAGGAGCGTC AGGAGCGCTC CAGCGCCACT GACCAGCATG CCGAGGTGCG TTGCCGTTAT
CTGGGGGCGG CGTTCCAGCT GCAGGACCGT TTGTTCCTCA TCGACTACGA GTCGCTGACG
TTCAACGAAA TGAGCCAGAC CATCCTCATC CCCAGCTTCA AAAGCCGAAT CACTCGCCTG
AACGGCCTGA AGGCCGGTGT GTCCAGCGGC GACCGGCGCA ACCCGGCCTG CACCAGGGTG
GTGTGGGAGT ACCTGGGTGA GGAGATCAAT CGCATCAATG CTTACCGGCA AGTGAAACTG
TACCGGCCGG ATGATCCGCG TATCGATGAT GATGTACGTG AGCGGCTAAG CGTGAGGCCA
CTGAGTAACG GTTTGTTTGA AATCGAGTAA
 
Protein sequence
MSDHFATNLK LACSHYRSIS EVCRQLSINR AQFNKYLSGQ SRPTAFNLKR IGDFFGVEDY 
ELNLPAEQFA RLIGARVSTL AEQPSDPISE LFRPLHDHAG NLSRYCGYYF EYSNCMSVPG
TILVSLVHLW EERGRFLFER QERQERSSAT DQHAEVRCRY LGAAFQLQDR LFLIDYESLT
FNEMSQTILI PSFKSRITRL NGLKAGVSSG DRRNPACTRV VWEYLGEEIN RINAYRQVKL
YRPDDPRIDD DVRERLSVRP LSNGLFEIE