Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0540 |
Symbol | |
ID | 5868286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 619237 |
End bp | 620046 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641545628 |
Product | Cro/CI family transcriptional regulator |
Protein accession | YP_001666787 |
Protein GI | 167031556 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.781184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATC ATTTCGCTAC CAACCTCAAG TTGGCCTGCA GCCACTACCG CTCTATTTCC GAAGTTTGCC GCCAGCTGTC GATCAACCGC GCACAGTTCA ACAAGTACCT GAGCGGGCAG AGCCGTCCGA CGGCTTTCAA CCTGAAGCGC ATCGGCGATT TCTTCGGCGT TGAGGATTAC GAGTTGAACC TGCCGGCCGA GCAGTTTGCC CGGCTGATTG GCGCACGGGT GTCGACCCTG GCCGAGCAGC CCAGCGACCC GATCAGTGAA CTGTTCCGCC CGCTGCACGA TCATGCCGGC AACCTGTCGC GCTATTGCGG TTACTACTTC GAGTATTCCA ACTGCATGTC GGTGCCGGGC ACGATCCTGG TGTCACTGGT GCACCTGTGG GAGGAGCGTG GCCGCTTCCT GTTCGAGCGC CAGGAGCGTC AGGAGCGCTC CAGCGCCACT GACCAGCATG CCGAGGTGCG TTGCCGTTAT CTGGGGGCGG CGTTCCAGCT GCAGGACCGT TTGTTCCTCA TCGACTACGA GTCGCTGACG TTCAACGAAA TGAGCCAGAC CATCCTCATC CCCAGCTTCA AAAGCCGAAT CACTCGCCTG AACGGCCTGA AGGCCGGTGT GTCCAGCGGC GACCGGCGCA ACCCGGCCTG CACCAGGGTG GTGTGGGAGT ACCTGGGTGA GGAGATCAAT CGCATCAATG CTTACCGGCA AGTGAAACTG TACCGGCCGG ATGATCCGCG TATCGATGAT GATGTACGTG AGCGGCTAAG CGTGAGGCCA CTGAGTAACG GTTTGTTTGA AATCGAGTAA
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Protein sequence | MSDHFATNLK LACSHYRSIS EVCRQLSINR AQFNKYLSGQ SRPTAFNLKR IGDFFGVEDY ELNLPAEQFA RLIGARVSTL AEQPSDPISE LFRPLHDHAG NLSRYCGYYF EYSNCMSVPG TILVSLVHLW EERGRFLFER QERQERSSAT DQHAEVRCRY LGAAFQLQDR LFLIDYESLT FNEMSQTILI PSFKSRITRL NGLKAGVSSG DRRNPACTRV VWEYLGEEIN RINAYRQVKL YRPDDPRIDD DVRERLSVRP LSNGLFEIE
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