Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0409 |
Symbol | |
ID | 5868147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 476317 |
End bp | 478617 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641545489 |
Product | coenzyme PQQ biosynthesis protein PqqF |
Protein accession | YP_001666656 |
Protein GI | 167031425 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like |
TIGRFAM ID | [TIGR02110] coenzyme PQQ biosynthesis probable peptidase PqqF |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACG CCACCCGCCA CCTCACCCTC GCCAACGGCC TGCAGCTTAC CCTGCGCCAT GCCCCGCGCC TGAAGCGCGC GGCCGCCGCA TTGCGGGTGC ACGCGGGTAG CCATGACGCG CCGGGAAAAT GGCCAGGGCT GGCCCACTTC CTCGAGCACC TGTTCTTCCT CGGCACCCCG CGCTTCCCCC TGGACGATGG CCTGATGCGC TACGTGCAGG CCCTCGGTGG CCAGGTCAAC GCCAGTACCC GTGAACGCAC CACCGATTTT TTCTTCGAAG TCCCGCCTAA TGCCTTGGCC GCAGGCCTCG AGCGCCTGTG CCAGATGCTG GCCGAGCCTG ACCTGGGCAT CGCGCGCCAA CGCCGCGAGC GCGAAGTGAT TCACGCCGAG TTCATCGCCT GGTCGCGCAA CCCACAGGCC CAGCAGCAAT TCGCCTTGCT GCAGACGCTG TCGCCCGCTC ATCCGCTGAG CGCTTTTCAT GCCGGCAACC GATACACCCT GGCCCTGCAG GACCCGGCCT TCCAGCAAGC GCTTGGGGGC TTTCACCGGC GCTTTTACCA AGGCGGCCAG ATCGTCTTGA GCCTATGCGG CCCGCAACCG CTGGATGAAC TGGAGCAACT GGGCCGGCAG CATGCTCAGC AGTTCGCCAC GGGCACGCGA GTACCGCACC TTCAGCCACC GCCCCTGTCG GCAGCGACTA TGCCACTGGC TTTTATCCAC GAGCACCTTC CGGCAGGTGC CGAGCAGGCG CTGGAACTGC TGATTGCCTG CCTGAATGAC AGCCGCCCAG GTACCTGGCT GGGTACACTG CGCGAGCGTG GCTGGCTGCA AGGTTTCAAG GCCGAAAAGC TGTATGCCTT CGCCGGGCAG TTGCTGTGGC ACCTGGACCT GAAGCTCAGC GCCAACGCCT GCCCAGATGA AGCCAATGAC CTGCTGCACG GTTGGTTCAA TTTCATCCGA CAAGCCGATC TCGCACAGCT GAACCGTGAC TTCGGCTTGC TGCAGCACAG CGGCGAACGC AGTGCCAGCG CACTTGAACT GGCCCGCCGG GACAGTACCG GGTTGCCGTT CAGCCAGTTG GATACACAAG GTTTGCAGGC CCTTCGTGCC CTGCTGGATG ACCTGCCATG CAGCAATCAT GGGCAATGGC AGATACCCAC GGTCGAGCCG TTGCTGATGG CTGACTTACC CACCGCCATG GCGCAGCCTC TACCGAACGC ACTGAAGATC AGTGACCAGC TCCCCGGCAC CCGCCAATAT GCGGCACTCT ACTTACGCTG GCACGTGCCT TCGCCTGTGC GCCAGCGCTT GCAGGGCGTG CTTGAACAGG CCCTCGCGCC GCTGCAGGAG CGATGTGAAC GCGCCTCGGT GCAACTGCAA TACACCACCG CAGGGGAATA CTGGCAGTTG CGCTGCGCCG GGCTGCCGGC CGCGGTGCTG CGCGCAGTGC CGCAGGCCTT GGCTTTGATG CTCACCCCCC CTGCCAGTTG CTGGCTGCCC AGCGCGGCGC CGCCCCCGGC ACTGATCCCT ATCAGGGCCT TGCTCAAGCA ACTGCCAGAC ACGGTGCTGC ATACCCCGCC CACAGCGGCA CCGGCCGGCA CGCTGAAACA GCAGCAACTC GACAGCCTGT GGCAGCACGC AAACTGGCAT GGCCTGGCTG CGGGCTTCGA CGATGCCGCG CTGAACGCCT TGGCTACCGC GTTGCAGCAC TGCCCCGGGC AAGGCGCACG GCCTGGCTCC CTGCCCACAT GGGCCAACCG TCGCTGGCAG CATGCCGAAG TGGCTGGCAG CGAATATGCC CTGCTGCTGT TCTGCCCGCT GCCTCCCGCC AGCGAAGCCG CAGGCCGCCT GCTAGCGCAA CTGCTGCAGG GGCCGGTTTA CCAACGCCTG CGGGTAGAGT TGCAACTCGG CTACGCGGTG TTCAGCGCCT TTCGTCAGGT CGAGGGGGTC GGCGGTCTAC TGTTCGGCGT GCAGTCCCCC CACACCGGCC AAGCGCAGGT CCTCGACCAC CTGCTCGCCC TGTTGCGCCA GGGTGTCACC CTGGACCCGG CCGCCCGCCA AGCCCTGGCC GAGCAATTCG ACGAGCCCGC CATGGCCAAT GCCGACGTCG CCGAATGGGC GTGGCAGACA CACCTGGCTA CACAACCCGG CAGGCTGGAT GCACTGCGCA GGACTATCCT GAACACGCGG CAGACGGATC TGGACCACCT GCTGAGCAAC CTGCTCGACA CAGGTTCCAC TTGGCTATGC CTGGCCAACG CTGCCGCGCC AAACCCTTCC TGGCAAGGCG CTGCACGATG A
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Protein sequence | MPDATRHLTL ANGLQLTLRH APRLKRAAAA LRVHAGSHDA PGKWPGLAHF LEHLFFLGTP RFPLDDGLMR YVQALGGQVN ASTRERTTDF FFEVPPNALA AGLERLCQML AEPDLGIARQ RREREVIHAE FIAWSRNPQA QQQFALLQTL SPAHPLSAFH AGNRYTLALQ DPAFQQALGG FHRRFYQGGQ IVLSLCGPQP LDELEQLGRQ HAQQFATGTR VPHLQPPPLS AATMPLAFIH EHLPAGAEQA LELLIACLND SRPGTWLGTL RERGWLQGFK AEKLYAFAGQ LLWHLDLKLS ANACPDEAND LLHGWFNFIR QADLAQLNRD FGLLQHSGER SASALELARR DSTGLPFSQL DTQGLQALRA LLDDLPCSNH GQWQIPTVEP LLMADLPTAM AQPLPNALKI SDQLPGTRQY AALYLRWHVP SPVRQRLQGV LEQALAPLQE RCERASVQLQ YTTAGEYWQL RCAGLPAAVL RAVPQALALM LTPPASCWLP SAAPPPALIP IRALLKQLPD TVLHTPPTAA PAGTLKQQQL DSLWQHANWH GLAAGFDDAA LNALATALQH CPGQGARPGS LPTWANRRWQ HAEVAGSEYA LLLFCPLPPA SEAAGRLLAQ LLQGPVYQRL RVELQLGYAV FSAFRQVEGV GGLLFGVQSP HTGQAQVLDH LLALLRQGVT LDPAARQALA EQFDEPAMAN ADVAEWAWQT HLATQPGRLD ALRRTILNTR QTDLDHLLSN LLDTGSTWLC LANAAAPNPS WQGAAR
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