| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0346 |
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| Symbol | |
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| ID | 5868086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 401080 |
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| End bp | 402330 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545428 |
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| Product | sarcosine oxidase beta subunit family protein |
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| Protein accession | YP_001666595 |
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| Protein GI | 167031364 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.940222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGTT ACTCGGGCTT CGGCCTTTTC AAGCACTCCC TCAGCCACCA CGAGAACTGG
CAGCGCATGT GGCGCACGCC AACCCCTAAA AAGGTGTACG ACGTGGTCAT CGTCGGCGGT
GGCGGCCATG GCTTGGCCAC GGCCTACTAC CTGGCCAAAG AGCACGGCAT CACCAACGTC
GCCGTGATCG AGAAGGGTTA CCTGGGCGGC GGCAACACCG CCCGTAACAC CACCATCGTG
CGTTCCAACT ACCTGTGGGA CGAGTCGGCC CACCTGTACG AGCACGCCAT GAAGCTGTGG
GAAGGCCTGT CCCAGGACCT CAACTACAAC GTGATGTTCT CCCAGCGCGG CGTCTACAAC
CTGTGCCACA CCTTGCAGGA CATGCGTGAC TCCGAGCGCC GTGTCAGCGC CAACCGCCTG
AACGGCGTGG ATGGCGAGCT GCTGAACACC GCCCAGGTCG CGGCCGAAAT CCCGTACCTG
GACTGCTCGA AGAACACCCG TTACCCGATC CTTGGCGCAA CCGTGCAGCG CCGTGGCGGC
GTGGCCCGTC ACGATGCCGT GGCCTGGGGC TTCGCCCGTG CTGCCGACGC CCTGGGCGTT
GACCTGATCC AGCAAACCGA AGTGATCGGC TTCCGCAAGG AAAACGGCGC GGTCATCGGC
GTGGAAACCA ACAAAGGCTT CATCGGCGCC AAGCGCGTCG GCGTAGTCAC CGCTGGTAAC
TCCGGGCACA TGGCCAAGCT GGCCGGCTTC CGCCTGCCGC TGGAATCGCA CCCGCTGCAA
GCGCTGGTAT CCGAGCCGAT CAAGCCGATC ATCGACAGCG TGATCATGTC CAACGCCGTA
CACGGCTACA TCAGCCAGTC CGACAAGGGC GACCTGGTGA TCGGTGCCGG TATCGACGGC
TGGGTCGGCT ACGGCCAGCG CGGTTCGTAC CCGGTGATCG AGCACACCCT GCAGGCCATC
GTCGAAATGT TCCCCAACCT CTCGCGCGTG CGCATGAACC GCCAGTGGGG CGGCATCGTC
GACACCTCGC CGGACGCCTG CCCGATCATC ACCAAGACCC CGGTCAAGAA CATGTTCTTC
AACTGCGGTT GGGGCACTGG CGGCTTCAAG GCGACCCCGG GTTCGGGCAA CGTCTTCGCC
GCGAGCCTGG CCAAGGGCGA AATGCACCCA TTGGCCGCGC CGTTCTCCAT GGACCGTTTC
TACAACGGCG CACTGATCGA CGAACACGGC GCCGCCGCCG TCGCCCACTA A
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| Protein sequence | MQRYSGFGLF KHSLSHHENW QRMWRTPTPK KVYDVVIVGG GGHGLATAYY LAKEHGITNV
AVIEKGYLGG GNTARNTTIV RSNYLWDESA HLYEHAMKLW EGLSQDLNYN VMFSQRGVYN
LCHTLQDMRD SERRVSANRL NGVDGELLNT AQVAAEIPYL DCSKNTRYPI LGATVQRRGG
VARHDAVAWG FARAADALGV DLIQQTEVIG FRKENGAVIG VETNKGFIGA KRVGVVTAGN
SGHMAKLAGF RLPLESHPLQ ALVSEPIKPI IDSVIMSNAV HGYISQSDKG DLVIGAGIDG
WVGYGQRGSY PVIEHTLQAI VEMFPNLSRV RMNRQWGGIV DTSPDACPII TKTPVKNMFF
NCGWGTGGFK ATPGSGNVFA ASLAKGEMHP LAAPFSMDRF YNGALIDEHG AAAVAH
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