| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0320 |
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| Symbol | |
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| ID | 5868060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 370301 |
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| End bp | 371146 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545402 |
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| Product | choline ABC transporter, permease protein |
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| Protein accession | YP_001666569 |
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| Protein GI | 167031338 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATCG ATCAGAAAAT ACCCCTGGGC CAGTACATCG CGTCGTTCGT CGAGTGGCTG
ACCCAGAACG GCGCGAATTA CTTCGACGCC ATCGCGCAAG GCCTGGAGTT CATGATCCAT
GGCGTCACCA ACGCCCTGAC CTGGTTCAAC CCGTTCGTTC TCATTGCCCT GTTCGCCGCC
CTGGCGCACT TGATCCAGCG CAAATGGGCG CTGACCGTGT TCGTTGCCCT ATCGTTCCTG
TTGATCCTCA ACCTGGGCTA CTGGCAGGAA ACCATGGAAA CCCTGGCGCA GGTCACCTTC
GCCACGGTGG TGTGCGTGGT AATCGGCGTG CCGCTGGGCA TCCTCGCCGC GCACAAACCG
ATGTTCTACA CCGCCATGCG GCCGGTGCTC GACCTGATGC AAACGGTGCC CACCTTCGTC
TACCTGATCC CAACCCTGAC CCTGTTCGGC CTGGGCGTGG TGCCGGGGCT GATCTCCACC
GTGGTATTCG CCATTGCCGC GCCTATTCGC CTGACTTACC TGGGCATCTG CGACGTGCCG
CAAGAGCTGA TGGACGCCGG CAAGGCCTTT GGCTGCTCGC GTCGCCAACT GCTTACCCGT
ATCGAACTGC CGCATGCGAT GCCCAGCATC GCCGCCGGCG TCACCCAGTG CATCATGCTG
TCGCTGTCGA TGGTGGTGAT TGCCGCCCTG GTCGGCGCTG ACGGCCTGGG CAAACCTGTG
GTCAACGCAC TGAACACCGC CGATATCTCC CTGGGCTTCG AAGCGGGCCT GGCGATCGTG
CTGCTGGCGA TCATGCTCGA CCGTATCTGC AAGCAACCGG AACTGCCGGT AAGGGGTGAG
GCATGA
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| Protein sequence | MLIDQKIPLG QYIASFVEWL TQNGANYFDA IAQGLEFMIH GVTNALTWFN PFVLIALFAA
LAHLIQRKWA LTVFVALSFL LILNLGYWQE TMETLAQVTF ATVVCVVIGV PLGILAAHKP
MFYTAMRPVL DLMQTVPTFV YLIPTLTLFG LGVVPGLIST VVFAIAAPIR LTYLGICDVP
QELMDAGKAF GCSRRQLLTR IELPHAMPSI AAGVTQCIML SLSMVVIAAL VGADGLGKPV
VNALNTADIS LGFEAGLAIV LLAIMLDRIC KQPELPVRGE A
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