| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0319 |
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| Symbol | |
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| ID | 5868059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 369126 |
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| End bp | 370304 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545401 |
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| Product | choline ABC transporter, ATP-binding protein |
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| Protein accession | YP_001666568 |
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| Protein GI | 167031337 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit
[TIGR03415] choline ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA TTCGTTTCGA AGACGTCGAC GTCATTTTCT CCAACAAGCC ACGCGAAGCG
CTGTCGCTGC TGGACCAAGG CAAGACCCGC GAGCAGATCC TCAAGCAGAC CGGCCTGGTG
GTTGGCGTCG AGAAGGCCAA CCTGGATATC AACAAGGGCG AGATCTGCGT GCTGATGGGC
CTGTCCGGCT CGGGCAAGTC GAGCCTGCTG CGCTGCATCA ACGGCCTCAA CACCGTCAGC
CGTGGCAAGC TGTTCGTCGA GCACGAAGGC AAGCACATCG ACATTGCCCA CTGCTCCCCG
GCCGAGCTGA AGATGATGCG CACCAAGCGC ATTGCCATGG TGTTCCAGAA GTTCGCCCTG
ATGCCCTGGC TGACGGTGCG CGAGAACATC AGCTTTGGTT TGGAAATGCA GGGCCGCCCG
GAAAAGGAAC GGCGCAAGCT GGTCGACGAG AAGCTTGAGC TGGTGGGCCT GACCCAATGG
CGCAACAAGA AGCCGGACGA GCTGTCAGGC GGCATGCAGC AGCGCGTGGG CCTGGCCCGT
GCACTGGCCA TGGATGCCGA CATCCTGTTG ATGGACGAAC CGTTCTCGGC CCTCGACCCG
CTGATCCGCC AGGGCCTGCA GGACGAACTG CTGGGCCTGC AGGCCAAGCT GAGCAAGACC
ATCGTGTTCG TCAGCCATGA CCTGGACGAG GCACTGAAGC TGGGTACCCG TATTGCGATC
ATGAAGGACG GGCGGATCAT CCAGTACAGC AAGCCGGAAG AAATCGTGCT CAACCCGGCC
GACGAATACG TGCGCACCTT CGTCGCCCAC ACCAACCCGC TGAACGTGCT GTGCGGCCGC
AGCCTGATGC GCAGCCTGGA CAACTGCAAG CGGGTCAATG GTTCGGTGTG CCTGGACCCC
GGTATCGATT CGTGGCTGGA CCTGGGCGAA GGCGGCGCGC TCAAGCGTGC TCGCCAGGGC
CAGAACGGGC TGGACATGCA GAACTGGGCA CCGGGGCAGG ATGTGGAGCT GCTGGAGCGC
AGACCGACCG TGGTGCACGC CGACATCGGC ATGCGCGAGG CGCTGCAGAT TCGTTATCAG
ACTGGCAACA AGCTGGTGCT GCAGGATAAC GACAGGGTGG TGGGGATTCT TGGGGATACC
GAGCTTTATC ACGCGTTGCT CGGCAAGAAT CACGGGTGA
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| Protein sequence | MSIIRFEDVD VIFSNKPREA LSLLDQGKTR EQILKQTGLV VGVEKANLDI NKGEICVLMG
LSGSGKSSLL RCINGLNTVS RGKLFVEHEG KHIDIAHCSP AELKMMRTKR IAMVFQKFAL
MPWLTVRENI SFGLEMQGRP EKERRKLVDE KLELVGLTQW RNKKPDELSG GMQQRVGLAR
ALAMDADILL MDEPFSALDP LIRQGLQDEL LGLQAKLSKT IVFVSHDLDE ALKLGTRIAI
MKDGRIIQYS KPEEIVLNPA DEYVRTFVAH TNPLNVLCGR SLMRSLDNCK RVNGSVCLDP
GIDSWLDLGE GGALKRARQG QNGLDMQNWA PGQDVELLER RPTVVHADIG MREALQIRYQ
TGNKLVLQDN DRVVGILGDT ELYHALLGKN HG
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