| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0305 |
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| Symbol | |
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| ID | 5868044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 354787 |
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| End bp | 355539 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641545386 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001666554 |
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| Protein GI | 167031323 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000409143 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.868034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACTT ACAAGAAGTT CCTCCTGGCA GCTGCTGCCA CGCTGGTGAT GTCGGCAAAC
GCCATGGCCG CAGAAAAACT GCGCATGGGT ATCGAAGCCG CCTACCCACC GTTCAACAAC
AAGGATGCCA GCGGTAACGT GGTTGGTTTC GACAAAGACA TCGGTGACGC CCTGTGCGCC
AAGATGAAAG TCGAATGCTC GGTCGTTACC TCCGACTGGG ACGGCATCAT CCCGGCTCTG
AACGCCAAGA AGTTCGACTT CCTGGTGTCG TCGCTGTCGA TCACCGACGA GCGCAAGCAG
GCCGTGGACT TCACCGAGCC GTACTACTCC AACAAGCTGC AATTCATCGC GCCGAAAAAC
GTCGACTTCA AGACTGACGC AGCGTCGCTG AAAGGCAAGT CCATCGGCAC CCAGCGCGCC
ACCCTGGCCG GCACCTACCT TGAAGACAAC TTCAAGGGCG TCGACGTGAA GCTGTACGAC
ACCCAGGAAA ACGCCTACCT GGACCTGGTG TCCGGCCGCA TCGACGGCAT CCTGGCCGAC
AAGTACGTAC AGTACGAGTG GCTGAAGAGC AAAGACGGCT CGAACTTCGA GTTCAAGGGC
GAGCCGGTGA TGGACAGCGA CAAGATCGGC ATTGCCGTGC GCAAAGGTGA CACCAAGCTG
CGCGACGACC TGAACAAAGC CCTGGCAGAA ATCAAAGCCG ACGGCACGTA CAAGAAGATC
AACGACAAGT ACTTCCCGTT CAGCATCGAA TGA
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| Protein sequence | MHTYKKFLLA AAATLVMSAN AMAAEKLRMG IEAAYPPFNN KDASGNVVGF DKDIGDALCA
KMKVECSVVT SDWDGIIPAL NAKKFDFLVS SLSITDERKQ AVDFTEPYYS NKLQFIAPKN
VDFKTDAASL KGKSIGTQRA TLAGTYLEDN FKGVDVKLYD TQENAYLDLV SGRIDGILAD
KYVQYEWLKS KDGSNFEFKG EPVMDSDKIG IAVRKGDTKL RDDLNKALAE IKADGTYKKI
NDKYFPFSIE
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