| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0304 |
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| Symbol | |
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| ID | 5868043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 354040 |
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| End bp | 354732 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545385 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001666553 |
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| Protein GI | 167031322 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0016104 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCG ACCTGCACGG ATTCGGTCCG GCCATGATGG CCGGCACCTT GATGACCGTA
AAACTGGCGC TTTGCGCCTT GCTGCTGGGG CTGGTGCTGG GCCTGCTCGG CGCCCTGGCC
AAGACCTCCC CGCTCAAGCC GCTGCAATGG CTTGGCGGCT TTTACTCGAC CCTGGTTCGC
GGCGTGCCCG AACTGCTGTG GGTGCTGCTT ATCTATTTCG GCACCGTCGG GCTGATGAAC
AGCCTCGGCG AAGCCCTGAA CATGCCTGGC CTTGAGCTGA GTGCCTTCGC GGCCGGCGTG
ATCGCCCTGG GCCTGTGCTT CGGCGCCTAT GCCACCGAGG TGTTCCGTGG CGCCATCCTG
GCGATTCCCA AGGGCCACCG TGAAGCGGGC CTGGCACTGG GCCTGTCCAA GGGCCGCATC
CTGTCGCGGA TCATCCTCCC GCAGATGTGG CGCATCGCCC TGCCCGGCCT TGGCAACCTG
TTCATGATCC TGATGAAGGA CACCGCACTG GTGTCGGTAA TCGGCCTTGA AGAGATCATG
CGTCATTCGC AGATAGGCGT GACCGTGACC AAAGAGCCGT TCACCTTCTA CATGGTCGCG
GCCTGCATTT ACCTGGGCCT GACCGTCCTT GCCATGACCG GCATGCACTT CATGGAAAAA
CGCGCCGCTC GCGGCTTTGC GAGGGCCGAA TAA
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| Protein sequence | MNIDLHGFGP AMMAGTLMTV KLALCALLLG LVLGLLGALA KTSPLKPLQW LGGFYSTLVR
GVPELLWVLL IYFGTVGLMN SLGEALNMPG LELSAFAAGV IALGLCFGAY ATEVFRGAIL
AIPKGHREAG LALGLSKGRI LSRIILPQMW RIALPGLGNL FMILMKDTAL VSVIGLEEIM
RHSQIGVTVT KEPFTFYMVA ACIYLGLTVL AMTGMHFMEK RAARGFARAE
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