Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0244 |
Symbol | |
ID | 5867941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 285396 |
End bp | 286505 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545324 |
Product | ABC transporter related |
Protein accession | YP_001666493 |
Protein GI | 167031262 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.177795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAGG CCAGCGCGCT CAGGGCGCCT ACCCCACAAC CATTGCCGCC AACGGTCAAG GAACAGGCTC TGCGCCCGGA AGTCAATGAA GCCCATGTGC GCTTCATCGG CCTGGGCAAG ACCTACCCTG GCCAGGCACA ACCGGCCTTG CAAGGCATCG ACCTGAACAT CCGCCATGGC GAGATTTTCG GCATCATCGG CCGTAGCGGC GCCGGCAAGT CTTCACTGCT GCGTACCATC AACCGCCTGG AGCAACCCAG CCAGGGCCGG ATACTGATCG ACCAGGTAGA CATCGCCCCC TTCGACGAGG ACCGCCTGGT GGCGCTGCGT CGGCGCATCG GCATGATCTT CCAGCACTTC AACCTGATGT CGGCCAAGAC TGTATGGCAG AACGTCGAGC TGCCGTTGAA GGTGGCCGGC GTGGCCAAGG CCGAGCGTCA GCACAAGGTG CGCGAGTTGC TGGAGCTGGT CGGTTTGCAG GAAAAGCACC ATGTGTACCC GGCGCAGCTG TCCGGCGGGC AGAAACAGCG CGTGGGCATT GCCCGAGCGC TGGTGCACGA CCCCGAGATC TTGCTGTGCG ACGAGGCCAC CTCGGCGCTG GACCCAGAGA CCACGGCCTC GATCCTTGAG CTGCTGCGCG ACATCAATCA GCGCCTGGGC CTGACCATCG TGCTGATCAC CCACGAAATG GCGGTAATCC GTGATATCTG CCATCGGGTG GTGGTGCTTG AGCGCGGTGA GGTGGTCGAG CAGGGCGAAG TCTGGCGGGT GTTCGGCTCT CCCCGCCACG AGGTCACCCG CACCCTGCTC GCACCCTTGC AGGCCAGGCT GCCAGCCGCA TTGCAAGCCA GCCTGCAGGC CAGCCCGGCG AGCCATGACA GCGCCGTGGT GCTGAAACTG ACAGTGCTCG GTGAGCCAGA GCTGTCTGCC CTGTTCCAAG ACTTGGGCGG GCGTGTGCGC CTGCTGCAGG GTGGCGTGGA AACCATCGGC GAGCATGCCC TGGGGCAGTT GATCCTGTCG GTGCAACACT CGCCGCACGA CACCCATCAA TTGCTGGAAC GTGCCCGCCG CTGGGCCGAG GACGTGGAGG TGCTGGGCCA TGTGGTTTGA
|
Protein sequence | MSQASALRAP TPQPLPPTVK EQALRPEVNE AHVRFIGLGK TYPGQAQPAL QGIDLNIRHG EIFGIIGRSG AGKSSLLRTI NRLEQPSQGR ILIDQVDIAP FDEDRLVALR RRIGMIFQHF NLMSAKTVWQ NVELPLKVAG VAKAERQHKV RELLELVGLQ EKHHVYPAQL SGGQKQRVGI ARALVHDPEI LLCDEATSAL DPETTASILE LLRDINQRLG LTIVLITHEM AVIRDICHRV VVLERGEVVE QGEVWRVFGS PRHEVTRTLL APLQARLPAA LQASLQASPA SHDSAVVLKL TVLGEPELSA LFQDLGGRVR LLQGGVETIG EHALGQLILS VQHSPHDTHQ LLERARRWAE DVEVLGHVV
|
| |