Gene PputGB1_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0232 
Symbol 
ID5867929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp268328 
End bp269365 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID641545312 
ProductNMT1/THI5-like domain-containing protein 
Protein accessionYP_001666481 
Protein GI167031250 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC CGTTGCGTCA CCTGATTACC GCCCTTGGGC TGGCGTTCAC CCTAAGTGCC 
CACGCGGCTG AACCGGCCAA GCCAGCAAGC ATCCGCATCG CCGTCCCCGA CCTGAGCGCC
GGCAGCAAGG CCAGCGCCGG TGGTGTGGTC GATGTACTGC GTGACCAGCA ATTGCTGGAG
AAGGAATTCG CCAAGGACGG CATCCGCATC GACTGGCGCT TTTTCAAGGG TGCCGGGCCG
GTGGTGAACG AGGCATTGGC CAACGGCCAG GCTGATTTCG CGTACCTCGG CGACCTGGCG
GCAATCGTCG GCAAGGCCAA TGGCCTGGAT ACCCGCGTGC TGTCGGCGGG CGTGCGCGGG
GTGAAGAGCT ACCTGGGCGT GGTACCGGGC TCTGGCATCA AGACCCTGCA CGACCTCAAG
GGCAAGCGTG TGGCGGTGTT CCGCGGCACT GCCAACCAGT TGTCGTTCGC CAGCGCCCTG
GCCAGCCAGG GGCTGAGCGA GCGTGAGCTG AAGGTGATAA ACCTCGATTT CAACGCCGCC
AACGCTGCGC TGGCGGCCAA GCAGATCGAT GCCACCTGGG GCCTGTCCAA CCTGCTATCG
CTGCGTGAGC GCGGGCTGGT CGAGCTACCG GTCAATTCGC GTGACCTCGA AGGCGCCGGC
AGCACCCAGG CAGTGCTGCT GGGCACCGGC GATTTCATCC GTCAATACCC CGAGCTGGTG
CAGCGCCTGG TCAATGCCCA GGAGCAGGCC AGTGCCTGGC TGCGCGACGA ACACAACCGT
CAGGCCTACA TCGATCTGGT GGCCAGCAAC GCCAATTGGC CGCGCAGCAT CCTCAGCGAT
GACCTGGCCA AGGAAGACCT CGCCCACTAC TTCGACCCAC GCCTGGACGC CGGATTCGTC
GGCCAACTGC AGCAAGGCGT CGACCTGGCT GCCAAGGAGC GTTTGATTCG CCGTGGCTTT
CAGGTGGCCG ACTGGATCGA ACCGCGTTTC CTCGATGCTG CGCTGAAACA GGAGCAGGCC
GTGCAGGCCG CCCGCTGA
 
Protein sequence
MKTPLRHLIT ALGLAFTLSA HAAEPAKPAS IRIAVPDLSA GSKASAGGVV DVLRDQQLLE 
KEFAKDGIRI DWRFFKGAGP VVNEALANGQ ADFAYLGDLA AIVGKANGLD TRVLSAGVRG
VKSYLGVVPG SGIKTLHDLK GKRVAVFRGT ANQLSFASAL ASQGLSEREL KVINLDFNAA
NAALAAKQID ATWGLSNLLS LRERGLVELP VNSRDLEGAG STQAVLLGTG DFIRQYPELV
QRLVNAQEQA SAWLRDEHNR QAYIDLVASN ANWPRSILSD DLAKEDLAHY FDPRLDAGFV
GQLQQGVDLA AKERLIRRGF QVADWIEPRF LDAALKQEQA VQAAR