Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0230 |
Symbol | |
ID | 5867927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 265566 |
End bp | 266429 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545310 |
Product | ABC transporter related |
Protein accession | YP_001666479 |
Protein GI | 167031248 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCT TCAACACTTC GCACCTGCAC GCGGCCAACC AGCCCGACGC AACCCCGCCC CTGGTCAGTT TCGAAGGGGT GGGCAAAGTG TTCAGCGTCG ATGGCCAACC GCTCGAGGCC ATCCGCAACT TCAACCTTTC GATCAACCAG GGCGAGTTCA TCGCCATCGT CGGCGCTTCC GGCTGCGGCA AGTCCACCCT GCTGCGCCTG CTGGTGGGGT TGGATACCGA CTACAGCGGC AGCATTCGCA TCGACGGCCA CGCCGTCAGC GGTATTGGTG GCGAACGTGG CATCGTGTTC CAGGAGCATC GGCTGTTTCC CTGGTTGAAC GTGGAACAGA ACATTGCGCT GGGCCTGGCC AACGAGTCGC TCACCCAAGG TGAGCGCGCC CGGCGGGTAC ATGAATTCGT ACAACTGGTG GGGCTGGTCG GCTTCGAGTC GGCCTATCCA CACCAGCTGT CCGGTGGTAT GGCCCAGCGT GTGGCGATAG CCCGTGGCCT GGTAGCCAGC CCGCGCATCC TGCTGCTTGA CGAGCCGTTC GGCGCACTGG ATGCGCTGAC CCGCCAGCAA CTGCAGGACG AATTGCTGGC CATTCGCGAG CGGGCGGGCA TCACCACCTT GCTGGTGACC CACGATGCCG AAGAGGCGAC GTACCTGGCG GATCGGGTTG TGGTGCTGGA GCCACGGCCG GGTCGCATCA AATCGGTGGT GGGCATAGAC CTGCCGCACC CGCGCTTGCG CTCCGGCGTA GCGCTGCACG GCCTGCGCGA AAAGGTGCTG CACCAGATCA CCGGCGACGG CGGCTACCTG CCGCCACCGT CACGCCGTGT AGAGGGCCTG AGGCCCGAGT TGATCGCCCT CTGA
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Protein sequence | MNAFNTSHLH AANQPDATPP LVSFEGVGKV FSVDGQPLEA IRNFNLSINQ GEFIAIVGAS GCGKSTLLRL LVGLDTDYSG SIRIDGHAVS GIGGERGIVF QEHRLFPWLN VEQNIALGLA NESLTQGERA RRVHEFVQLV GLVGFESAYP HQLSGGMAQR VAIARGLVAS PRILLLDEPF GALDALTRQQ LQDELLAIRE RAGITTLLVT HDAEEATYLA DRVVVLEPRP GRIKSVVGID LPHPRLRSGV ALHGLREKVL HQITGDGGYL PPPSRRVEGL RPELIAL
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