Gene PputGB1_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0230 
Symbol 
ID5867927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp265566 
End bp266429 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID641545310 
ProductABC transporter related 
Protein accessionYP_001666479 
Protein GI167031248 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT TCAACACTTC GCACCTGCAC GCGGCCAACC AGCCCGACGC AACCCCGCCC 
CTGGTCAGTT TCGAAGGGGT GGGCAAAGTG TTCAGCGTCG ATGGCCAACC GCTCGAGGCC
ATCCGCAACT TCAACCTTTC GATCAACCAG GGCGAGTTCA TCGCCATCGT CGGCGCTTCC
GGCTGCGGCA AGTCCACCCT GCTGCGCCTG CTGGTGGGGT TGGATACCGA CTACAGCGGC
AGCATTCGCA TCGACGGCCA CGCCGTCAGC GGTATTGGTG GCGAACGTGG CATCGTGTTC
CAGGAGCATC GGCTGTTTCC CTGGTTGAAC GTGGAACAGA ACATTGCGCT GGGCCTGGCC
AACGAGTCGC TCACCCAAGG TGAGCGCGCC CGGCGGGTAC ATGAATTCGT ACAACTGGTG
GGGCTGGTCG GCTTCGAGTC GGCCTATCCA CACCAGCTGT CCGGTGGTAT GGCCCAGCGT
GTGGCGATAG CCCGTGGCCT GGTAGCCAGC CCGCGCATCC TGCTGCTTGA CGAGCCGTTC
GGCGCACTGG ATGCGCTGAC CCGCCAGCAA CTGCAGGACG AATTGCTGGC CATTCGCGAG
CGGGCGGGCA TCACCACCTT GCTGGTGACC CACGATGCCG AAGAGGCGAC GTACCTGGCG
GATCGGGTTG TGGTGCTGGA GCCACGGCCG GGTCGCATCA AATCGGTGGT GGGCATAGAC
CTGCCGCACC CGCGCTTGCG CTCCGGCGTA GCGCTGCACG GCCTGCGCGA AAAGGTGCTG
CACCAGATCA CCGGCGACGG CGGCTACCTG CCGCCACCGT CACGCCGTGT AGAGGGCCTG
AGGCCCGAGT TGATCGCCCT CTGA
 
Protein sequence
MNAFNTSHLH AANQPDATPP LVSFEGVGKV FSVDGQPLEA IRNFNLSINQ GEFIAIVGAS 
GCGKSTLLRL LVGLDTDYSG SIRIDGHAVS GIGGERGIVF QEHRLFPWLN VEQNIALGLA
NESLTQGERA RRVHEFVQLV GLVGFESAYP HQLSGGMAQR VAIARGLVAS PRILLLDEPF
GALDALTRQQ LQDELLAIRE RAGITTLLVT HDAEEATYLA DRVVVLEPRP GRIKSVVGID
LPHPRLRSGV ALHGLREKVL HQITGDGGYL PPPSRRVEGL RPELIAL