| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0199 |
|---|
| Symbol | |
|---|
| ID | 5867895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 235815 |
|---|
| End bp | 236609 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641545278 |
|---|
| Product | Sel1 domain-containing protein |
|---|
| Protein accession | YP_001666448 |
|---|
| Protein GI | 167031217 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.733314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCTG CCAGCAATAT CCATTCGCTG CTTGCCCGCC TTCTACCCGA GCGGGTCATC
GCCCCACCGG CTCCCGTCGG GAGGCGACAG CGGCTGTTTG CCGGTGTGGG CTTGCCCAGC
CAGCGGTCGC TGCTGGTCAA CCGCCTGGAT GAGGCCAGCG ACCTGCAGGC AGTGTATGTC
GACCTTCGCC GTCAGGCGTT GCAAGGCAGT GTGGCGGCAC TGAATGACCT TGGCTGGATC
TGGCTCAACG GCAAGTACTG GCGCGCCGAT ACCGAATTGG CCGGGCACCT GTTGCGCATG
GCGGCCCTGC AGGGCAATGC TGCTGCCTGG TTCAACCTTG GGCAGCAGCA CTACTTCGGC
AAGGGCATCG AGCCTTCCTA CGTGCAGGCG GCGGAGTGCT ACCGCCAGGC CTTCGAGCGC
GGGATGCTGC ATGCCGCGGC GGCGCTGGGA GACCTGTATG AGGAGGAGGT GTGCGATGGC
GACCTGGATT GGCAGGTAGA CCTGGTGCAG GCCTACCAGT GGTTCCTGCG CGGGGCCGAG
CGGGGCGAGG CGCGTTGCCG TTTCGAGGTG GGCTACCGGT TGATGCACGG GCTGTATGTA
GAGGCCGACC TCAAGGCGGC GCTGTACTGG CTGGAGCTGG CGGCAGCGGC GGGAGTCGTG
CAGGCGGCAG AGGAATTGGC AGTGCATTTC AGCAGCCGTG ACGTGGTGCG CTACCAGGAG
TGGCGGGACC GGGCAGTGCA AATGGGTAGC ACCTTGGCTT TGACCATGAA GTTGGAAGAT
CAGATCCAAT CCTGA
|
|---|
| Protein sequence | MSAASNIHSL LARLLPERVI APPAPVGRRQ RLFAGVGLPS QRSLLVNRLD EASDLQAVYV
DLRRQALQGS VAALNDLGWI WLNGKYWRAD TELAGHLLRM AALQGNAAAW FNLGQQHYFG
KGIEPSYVQA AECYRQAFER GMLHAAAALG DLYEEEVCDG DLDWQVDLVQ AYQWFLRGAE
RGEARCRFEV GYRLMHGLYV EADLKAALYW LELAAAAGVV QAAEELAVHF SSRDVVRYQE
WRDRAVQMGS TLALTMKLED QIQS
|
|---|
| |