| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0170 |
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| Symbol | |
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| ID | 5867858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 174572 |
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| End bp | 176065 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545243 |
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| Product | succinate CoA transferase |
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| Protein accession | YP_001666422 |
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| Protein GI | 167031191 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0427] Acetyl-CoA hydrolase |
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| TIGRFAM ID | [TIGR03458] succinate CoA transferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.696891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGTG ATCGTATCCG CTTGTCCTCC CTGCACAGCA AGGTAATGAG TGCGGCTGAT
GCCGCTGGTC TGATCGAGGA CGGCATGACC GTCGGCATGA GCGGTTTCAC CCGCGCCGGC
GAAGCCAAGG CCGTACCGCA TGCACTGGCC GAACGTGCCA AGCAGTCGCC ACTGAAAATC
AGCCTGATGA CCGGCGCCAG CCTGGGCAAC GACCTGGACA AGCAACTGAC CGAGGCCGGC
GTGCTGGCTC GCCGCATGCC GTTCCAGGTC GACAGCACCC TGCGCAAGGC CATTAACGAT
GGCCAGGTGA TGTTCATCGA CCAGCACCTG TCGGAAACCG TCGAGCAATT GCGCAACCAG
CAGCTGAAGC TGCCGGACAT CGCAGTCATC GAAGCCGTGG CCATCACCGA GCAAGGCCAC
ATCGTGCCGA CCACCTCGGT GGGCAACTCG GCCAGCTTCG CGATCTTCGC CAAGCAGGTG
ATTGTCGAGA TCAACCTCTC GCACAACACC AACCTCGAAG GCCTGCATGA CATCTACATC
CCGACCTACC GCCCGACCCG CACCCCCATC CCGCTGGTCA AGGTAGACGA CCGTATCGGC
AGCACCGCCA TCCCGATCGA CCCGGCCAAG ATCGTCGGTA TCGTCATCAG CGACCAGCCA
GACTCGCCGT CCACTGTGCT GCCGCCAGAT GATGAAACCC AAGGCATCGC CGACCACCTG
ATCAACTTCC TCAAAAAGGA AGTGGACGCT GGCCGCATGA CCAACAAGCT CGGCCCGCTG
CAAGCCGGTA TCGGCAGCAT CGCCAACGCG GTGATGTGCG GCCTGATCGA ATCGCCGTTC
GAAGACCTGA CCATGTACTC CGAAGTACTG CAGGACTCCA CCTTCGACCT GATCGACGCC
GGCAAGCTGA GCTTCGCCTC GGGCAGCTCG ATCACCTTGT CCAGCCGCCG CAACGCCGAC
GTGTTCGGCA ACCTGGAGCG CTACAAGGAC AAGCTGGTGC TGCGCCCGCA GGAAATCTCC
AACCACCCGG AAGTGGTACG TCGCCTGGGC ATTATTGGTA TCAACACCGC ACTGGAGTTC
GATATCTACG GCAACGTCAA CTCCACCCAC GTCTGCGGTA CCCGGATGAT GAACGGCATT
GGCGGTTCGG GCGATTTCGC TCGTAACGCC CACCTGGCCG TATTCGTCAC CAAGTCGATT
GCCAAAGGTG GCGCGATTTC CAGCGTGGTG CCAATGGTCA GCCATGTCGA TCACACCGAG
CACGACGTGG ACATCCTGGT CACCGAGCAG GGCCTGGCCG ACCTGCGTGG TCTGGCGCCG
CGCGAACGGG CACGGGCGAT CATCGACAAC TGTGTGCACC CAGACTACCG CGCTGCGCTG
AACGATTACT TCGATCGCGC CTGCCAGCGT GGCGGCCATA CCCCGCACAT CCTGCGTGAA
GCGTTGAGCT GGCACGAGAA CCTGGAAGAA ACCGGGCGCA TGCTGGCTAG CTGA
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| Protein sequence | MYRDRIRLSS LHSKVMSAAD AAGLIEDGMT VGMSGFTRAG EAKAVPHALA ERAKQSPLKI
SLMTGASLGN DLDKQLTEAG VLARRMPFQV DSTLRKAIND GQVMFIDQHL SETVEQLRNQ
QLKLPDIAVI EAVAITEQGH IVPTTSVGNS ASFAIFAKQV IVEINLSHNT NLEGLHDIYI
PTYRPTRTPI PLVKVDDRIG STAIPIDPAK IVGIVISDQP DSPSTVLPPD DETQGIADHL
INFLKKEVDA GRMTNKLGPL QAGIGSIANA VMCGLIESPF EDLTMYSEVL QDSTFDLIDA
GKLSFASGSS ITLSSRRNAD VFGNLERYKD KLVLRPQEIS NHPEVVRRLG IIGINTALEF
DIYGNVNSTH VCGTRMMNGI GGSGDFARNA HLAVFVTKSI AKGGAISSVV PMVSHVDHTE
HDVDILVTEQ GLADLRGLAP RERARAIIDN CVHPDYRAAL NDYFDRACQR GGHTPHILRE
ALSWHENLEE TGRMLAS
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