Gene PputGB1_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0128 
Symbol 
ID5867816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp130499 
End bp131170 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content61% 
IMG OID641545201 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001666380 
Protein GI167031149 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0851802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC TGAATTTCTT CGCCAACGTC GACTGGGCCG AAATCTGGCT GGCCACCATC 
GACACCATGA TCATGCTGTT CGGCTCGCTG TTCTTCACCG TGCTGCTGGG CCTGCCGCTG
GGTGTGCTGC TGTTCCTCTG CGGGCCGAAG CAGATGTTCG AACAGAAGGG CGTGTACGCG
CTGCTGTCGC TGGTGGTCAA CATCCTGCGC TCGCTGCCGT TCATCATCCT GCTGATCGTG
ATGATCCCAT TCACCGTGCT GATCACCGGC ACCTCGCTGG GCGTTGCCGG CGCCATCCCA
CCACTGGTAG TGGGTGCCAC GCCGTTCTTT GCCCGCCTGG TTGAAACCGC TCTGCGTGAA
GTGGACCGCG GCATCATCGA AGCCACCCAG TCGATGGGCG CCACCACCCG CCAGATCATC
ACCAGCGCAC TGCTGCCGGA GGCCCGCCCG GGTATCTTCG CAGCCATTAC CGTCACCGCC
ATCACCCTGG TTTCGTACAC CGCCATGGCC GGTGTGGTGG GTGCGGGCGG CCTGGGCGAT
CTGGCTATCC GCTTCGGTTA CCAGCGTTTC CAGACCGATG TGATGGTAGT GACCGTGGTT
CTGCTGCTGG TACTGGTTCA AGTCCTGCAA AGCGTGGGCG ACAAACTGGT CGTACATTTT
TCCCGTAAGT AA
 
Protein sequence
MDALNFFANV DWAEIWLATI DTMIMLFGSL FFTVLLGLPL GVLLFLCGPK QMFEQKGVYA 
LLSLVVNILR SLPFIILLIV MIPFTVLITG TSLGVAGAIP PLVVGATPFF ARLVETALRE
VDRGIIEATQ SMGATTRQII TSALLPEARP GIFAAITVTA ITLVSYTAMA GVVGAGGLGD
LAIRFGYQRF QTDVMVVTVV LLLVLVQVLQ SVGDKLVVHF SRK