Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0128 |
Symbol | |
ID | 5867816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 130499 |
End bp | 131170 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641545201 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001666380 |
Protein GI | 167031149 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0851802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCCC TGAATTTCTT CGCCAACGTC GACTGGGCCG AAATCTGGCT GGCCACCATC GACACCATGA TCATGCTGTT CGGCTCGCTG TTCTTCACCG TGCTGCTGGG CCTGCCGCTG GGTGTGCTGC TGTTCCTCTG CGGGCCGAAG CAGATGTTCG AACAGAAGGG CGTGTACGCG CTGCTGTCGC TGGTGGTCAA CATCCTGCGC TCGCTGCCGT TCATCATCCT GCTGATCGTG ATGATCCCAT TCACCGTGCT GATCACCGGC ACCTCGCTGG GCGTTGCCGG CGCCATCCCA CCACTGGTAG TGGGTGCCAC GCCGTTCTTT GCCCGCCTGG TTGAAACCGC TCTGCGTGAA GTGGACCGCG GCATCATCGA AGCCACCCAG TCGATGGGCG CCACCACCCG CCAGATCATC ACCAGCGCAC TGCTGCCGGA GGCCCGCCCG GGTATCTTCG CAGCCATTAC CGTCACCGCC ATCACCCTGG TTTCGTACAC CGCCATGGCC GGTGTGGTGG GTGCGGGCGG CCTGGGCGAT CTGGCTATCC GCTTCGGTTA CCAGCGTTTC CAGACCGATG TGATGGTAGT GACCGTGGTT CTGCTGCTGG TACTGGTTCA AGTCCTGCAA AGCGTGGGCG ACAAACTGGT CGTACATTTT TCCCGTAAGT AA
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Protein sequence | MDALNFFANV DWAEIWLATI DTMIMLFGSL FFTVLLGLPL GVLLFLCGPK QMFEQKGVYA LLSLVVNILR SLPFIILLIV MIPFTVLITG TSLGVAGAIP PLVVGATPFF ARLVETALRE VDRGIIEATQ SMGATTRQII TSALLPEARP GIFAAITVTA ITLVSYTAMA GVVGAGGLGD LAIRFGYQRF QTDVMVVTVV LLLVLVQVLQ SVGDKLVVHF SRK
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