Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0048 |
Symbol | |
ID | 5867736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 50404 |
End bp | 51387 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641545121 |
Product | ribonuclease III |
Protein accession | YP_001666300 |
Protein GI | 167031069 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.122518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACAT TACATCGCTT TCCCGAGCGC CCTGATCCCT TGTTAACCAT CGTGGTCCCT TGCTTCCAGG AAGAGGAAAC CATCCCCGAG TTCCACCAGC GAATCACCCG CGTGGTGAAG CGCTTACCCG TCTCCTGCGA AATCCTCTAT GTCGACGACG GCAGTAATGA CCGGACGGCC GACATTCTTC GCCACTATCA GGATGGGTCA TCTGTACGTT GCCTGTCCCT GAGTCGCAAC TTCGGCAAAG AGGCTGCACT GAGCGCCGGG ATAGACCATG CCCGTGGCAG TGCGCTGATC TTCATTGATG TCGACCTGCA GGATCCACCA GAGCTCATCG CGGCCATGGT GGACTACTGG CAACGCGGCT ACGACGTGGT GAACATGCAG CGCAACCTGA GAATCGGTGA TTCGTGGTTC AAGCGCATGA GTGCCCGGGC TTACTACTGG GTCATGCAGC GCCTGGTGGA GAAGGTGGAC ATGCCGGCCG ATGTCAGCGA TTTCCGATTG ATTGGGCCTG CGCCGCTGGC AGCCCTGCGG GCCCTGGATG AACGCTCCAG GATTCTCAAA GGCATGATCG GCTGGGTAGG CTTTCGTACC ATCGAACTCC CCTACAATCG CACTGTTCGC CATGCCGGGA GCACCAAATG GAATGCAGCT GGCCTGTTCA ATCTGGCCAT CGAGAGCATC GTCAGCTTCT CTCGCAAACC ACTGCGCATT TTCAGCCTCA TCAGTTTCGG TCTTTTCGTC TCCAGCATCT GCTACATGCT TGCGTCGCTT GTGGCAGGCA GTTTCGACAT CCATCACCTG ATCGTCGGAA TGGCTTCATT CATGTGCGTC GGTGTCGCCA TGGTGGGGGA GTACCTGGGC GTGACACTCG CGGAAGTGAA GCGCCGGCCT CTCTATTTCC TGAAGCACAG CAACAAGGCA GATCCCGTGT CACTCCACCC TTCGATGGCT TCGATCGAGG GTAAGAAATG CTGA
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Protein sequence | MQTLHRFPER PDPLLTIVVP CFQEEETIPE FHQRITRVVK RLPVSCEILY VDDGSNDRTA DILRHYQDGS SVRCLSLSRN FGKEAALSAG IDHARGSALI FIDVDLQDPP ELIAAMVDYW QRGYDVVNMQ RNLRIGDSWF KRMSARAYYW VMQRLVEKVD MPADVSDFRL IGPAPLAALR ALDERSRILK GMIGWVGFRT IELPYNRTVR HAGSTKWNAA GLFNLAIESI VSFSRKPLRI FSLISFGLFV SSICYMLASL VAGSFDIHHL IVGMASFMCV GVAMVGEYLG VTLAEVKRRP LYFLKHSNKA DPVSLHPSMA SIEGKKC
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