Gene PputGB1_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0017 
Symbol 
ID5868016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp17629 
End bp19587 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content58% 
IMG OID641545090 
ProductCopA family copper resistance protein 
Protein accessionYP_001666269 
Protein GI167031038 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0816359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCA AAACCACGAG ACGTTCATTC GTCAAAGGCC TGGCTGCTAC CGGACTACTG 
GGTGGGCTGG GCATGTGGCG CGCGCCGGTC TGGGCCGTAA CCAGCCCTGG CCAGCCTAAC
GTACTGACCG GCACCGATTT TGACCTGTAC ATCGGGGAGC TCCCGGTGAA CATTACCGGG
GCAGCTCGAA CGGCGATGGC CATCAACGGT TCGCTGCCAG GACCAATACT CCGTTGGCGC
GAAGGCGACA CGGTCACGCT ACGGGTTCGC AACCGCTTGA AGCAGGACAC GTCCATCCAC
TGGCACGGCA TCATCCTGCC GGCGAATATG GACGGCGTGC CGGGTCTAAG CTTCCATGGC
ATCGCTCCCG ACGGCATGTA CGAGTACAAG TTCAAGGTCC ACCAGAACGG CACCTACTGG
TACCACAGCC ATTCGGGCTT CCAGGAGCAG GTCGGTGTTT ACGGTGCGCT GGTGATTGAT
GCCAAGGATC CAGAGCCTTT CACCTACGAT CGTGACTATG TCGTCATGCT GAGTGATTGG
ACCGACGAAG ACCCGGCGCG GGTTATGTCC AAGCTCAAAA AACAGTCGGA CTATTACAAC
TTCCACAAGC GCACCGTTGG CGACTTCGTC GACGACGTGA GCGAGAAAGG TTGGTCTGCT
GCTGTGGCCG ATCGAAAGAT GTGGGCCGAG ATGAAGATGA GCCCAACCGA TCTCGCTGAC
GTGAGCGGGC ACACCTACAC CTACCTCATG AACGGCCAGG CGCCAAATGG GAACTGGACG
GGAATCTTCA AGCCAGGGGA GAAAATCCGG CTTCGCTTTA TCAATGGCTC GGCGATGACC
TATTTCGACG TGCGGATCCC CGGCTTGAAA ATGACGGTTG TCGCAGCCGA CGGTCAGTAC
GTTAAGCCAG TGTCGATCGA TGAATTCCGG ATTGCCGTTG CTGAAACCTA CGATGTCATT
GTCGAGCCTG AAAACGAGCA GGCTTACACC ATCTTTGCTC AATCCATGGA TCGCACCGGC
TATTCAAGGG GTACCTTGGC TGTCCGTGAG GGCCTGCAGG CACCGGTGCC GGCTGTAGAT
CCAAGGCCTC TCATCTCCAT GAGTGATATG GGGATGGACC ACGGCAGCAT GGGTGGCATG
GATCACGGCA GCATGGCCGG TATGGACCAC AGCAAGATGG CTGGCATGGA CCACGGCAGC
ATGGCCGGTA TGGACCATAG CAAGATGGCT GGCATGGACC ACGGCAGCAT GGCCGGTATG
GACCATAGCA AGATGGCTGG CATGGACCAC GGCAGCATGG CCGGTATGGA CCATAGCAAG
ATGGCTGGCA TGGACCACGG CAGCATGGCC GGTATGGACC ATAGCAAGAT GGCTGGCATG
GACCACGGCA ACATGACCGG TATGGACCAA AGCAATATGG CCGCCAGCGG TGCCATGCAG
AACCATCCCG CCTCCGAAAC AAACAACCCT CTGGTCGATA TGCAGACCAT GACCCCTACG
CCAAAGCTGA GCGATCCGGG GATCGGGCTT CGCGATAACG GGCGTCGGGT TCTCACGTAT
TCGGATTTGC GTAGCACCTT CATCGACCCT GACGGCCGGG AACCTGGCCG GACAATCGAA
CTGCACCTTA CCGGGCATAT GGAAAAGTTC GCTTGGTCCT TCGATGGGAT CAAGTTTTCT
GACGCAGAGC CGCTGCGGCT CAAGTACGGC GAGCGCCTGC GTATTACCTT GGTCAACGAC
ACCATGATGA CTCACCCCAT CCATCTGCAC GGCATGTGGA GTGACCTGGA GGATGAGGAC
GGCAATTTCA TGGTGCGAAA ACACACGATC GATATGCCGC CTGGCTCGAA ACGAAGCTAT
CGCGTAACCG CAGATGCACT CGGGCGCTGG GCCTATCACT GTCACCTCAT GTACCACATG
GAGATGGGCA TGTTCCGAGA AGTCCGCGTG GACGAATGA
 
Protein sequence
MQSKTTRRSF VKGLAATGLL GGLGMWRAPV WAVTSPGQPN VLTGTDFDLY IGELPVNITG 
AARTAMAING SLPGPILRWR EGDTVTLRVR NRLKQDTSIH WHGIILPANM DGVPGLSFHG
IAPDGMYEYK FKVHQNGTYW YHSHSGFQEQ VGVYGALVID AKDPEPFTYD RDYVVMLSDW
TDEDPARVMS KLKKQSDYYN FHKRTVGDFV DDVSEKGWSA AVADRKMWAE MKMSPTDLAD
VSGHTYTYLM NGQAPNGNWT GIFKPGEKIR LRFINGSAMT YFDVRIPGLK MTVVAADGQY
VKPVSIDEFR IAVAETYDVI VEPENEQAYT IFAQSMDRTG YSRGTLAVRE GLQAPVPAVD
PRPLISMSDM GMDHGSMGGM DHGSMAGMDH SKMAGMDHGS MAGMDHSKMA GMDHGSMAGM
DHSKMAGMDH GSMAGMDHSK MAGMDHGSMA GMDHSKMAGM DHGNMTGMDQ SNMAASGAMQ
NHPASETNNP LVDMQTMTPT PKLSDPGIGL RDNGRRVLTY SDLRSTFIDP DGREPGRTIE
LHLTGHMEKF AWSFDGIKFS DAEPLRLKYG ERLRITLVND TMMTHPIHLH GMWSDLEDED
GNFMVRKHTI DMPPGSKRSY RVTADALGRW AYHCHLMYHM EMGMFREVRV DE