Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3810 |
Symbol | |
ID | 4571445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008607 |
Strand | + |
Start bp | 187378 |
End bp | 188586 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639753996 |
Product | HipA domain-containing protein |
Protein accession | YP_899651 |
Protein GI | 118577411 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.842886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAATCA CGCCACACAC CCTTGCTGTC TGGGCGGACG ACCAGAGAGC CGGCCTCCTG GATCGATCTA TTGATCAGCA TCAGTATGTG TTCGCATACG ACCCGGCTGC CGAGTCTCCG TCGGCTCAAG TCTCGCTGAC CATGCCCGTG CGGCTGGAGA GCTGGGCGAG CCGTGACCTG CATCCGATAT TCCAAATGAA CCTACCTGAG GGGGCGCTCC TGGAGGCAAT CCGGAGGACT GTTTCGAAAC TGATCGGCGA AGACGATCTA ACGATTCTTC GGGTGACTGG TGGCAACCAG GTCGGACGTA ACCGTTTCTC TCTCGCGGCT GACCCGGCGC CCGGGATCGT AGAAACCAAA GAGTCATTGG ATGAGTTGCT GTCGTATCCG GACACAGAAG AGTTGTTCAA CGATCTGGTG GCGAAGTATG CCCTGCGCTC CGGGGTATCT GGTGTTCAGC CGAAGGTGAT GCTCGATGCG ACGGAACGAG GAACCGCCGC CGTCGGTGGC TACATCGTGA AGTCCTGGGG GAGCGAGTAT CCCCAGTTGG CGGCGAATGA GTTCTTTTGC ATGACCGCGG CAAAACGCGC AGGCCTCTCG GTCCCGGAAT TCCATTTGTC TGAAAACGGT GGGCTGTTCG TGATGAAGCG CTTTGATCTG GGAGAAAGGG GGGAGCCACT CGGCTTTGAG GACATATGCT CCTTGCAGGC CTTGGCTACA ACCCGGAAAT ACAGCAGCAC CTACGAACGT GTTGCGCGGA CGATCAAGGA TTTCGTTTCC CCAGCAGCTC TACTGGTCGC GCGTGAGCAG TTTTTCGCTT CACTCGTGCT GTCCTGTATG GTACGCAATG GGGACGCCCA CCTGAAGAAT TTTGGTGTCC TGTATGATCG CCCCGGTCAG CTGGTCCAAT TGGCGCCCGT CTATGATGTG GTGACAACCA CGGCGTATAT CCCAAAGGAC GTGCCGGCAC TCAGTCTGTT TGGGACAAAG AAATGGTGGT CACGGAGAGC GCTAGAGCGC TTCGCTGTGT CTCATCTGAG TTTGCCTGTC GGGAGGGTGG GGCAGATCCT GGAGAAGGTC GCCGAGGCGG TGACCGATAC CCGGGGGATC GTATCAGCTT ACATGGTGGA GCACCCAGAG TATCGAGAGG TGGGGAACCT GCAGCTTGCG TCTTGGGAAG TCGGCGTGGC AAATTTAGTG CTGATATGA
|
Protein sequence | MTITPHTLAV WADDQRAGLL DRSIDQHQYV FAYDPAAESP SAQVSLTMPV RLESWASRDL HPIFQMNLPE GALLEAIRRT VSKLIGEDDL TILRVTGGNQ VGRNRFSLAA DPAPGIVETK ESLDELLSYP DTEELFNDLV AKYALRSGVS GVQPKVMLDA TERGTAAVGG YIVKSWGSEY PQLAANEFFC MTAAKRAGLS VPEFHLSENG GLFVMKRFDL GERGEPLGFE DICSLQALAT TRKYSSTYER VARTIKDFVS PAALLVAREQ FFASLVLSCM VRNGDAHLKN FGVLYDRPGQ LVQLAPVYDV VTTTAYIPKD VPALSLFGTK KWWSRRALER FAVSHLSLPV GRVGQILEKV AEAVTDTRGI VSAYMVEHPE YREVGNLQLA SWEVGVANLV LI
|
| |