| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3593 |
|---|
| Symbol | |
|---|
| ID | 4574673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3972929 |
|---|
| End bp | 3973969 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639757652 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_903242 |
|---|
| Protein GI | 118581992 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00282179 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCTC CCTCCATCGA TATCATCGTC CCTGTCTGGA ACAGCCCCTT CCAAGCCCGC
GCCTGTCTGA GCGCCATCCT GACCCACTCC CCGGGTGTGC GCCTGATTAT CGTTGACAAC
GGCAGCGATC GTCAGACCCA ACTGGTGCTG GAGGAATTCT CCGAGCCGCT GGGCGAGAAC
TGTCTCTTCA TCTCCTCTGA CCGCAATCTG GGGCTGGTGC CTGCCATCAA CATGGGCCTG
AGCCGTTCCG ATGGCGACTG CGCCGTGATC GTACGCCCCC ATGTCACCGT GTCCGAGGGG
TGGCTGGAAG GGCTGGTGGA GGCCGCCGAT GCCGGCCTGG CCTCGCCGCT CTTCAGCGGC
CCGGGCGCCC CCTTCCCTCC CCCGCTGGCG CGCGGCTGCA GCAGGATGGA AACCTTCGAC
GTCTCCTTTT CCACCCTGGC CTTGCGGACG GAGCTGTACA TGCTGCTGGG CGGTTTCGAC
GAAAAGCTGG ATGGCGGCCA GTGGTGCCTG CACGACTACG TTAGCCGCGC CGCCAGCAGG
GGCTATCGCA CCTGTGTCAC CTCCGCTTCC ACGGTCGTCT GCGCTGTTGC CCCCGTGCTC
GGCTCCGACG CACGCCGCCG GGAGCTTGTC CAGGCCAGCA GGAACAGGTG CATTGAGCGC
TGGGGCGAGG GGAGGCACTA CGGCGTCTAC TTCGGCCGCG GCGTGGCGGC CGAAAGCCTG
GCCGACGCCA TTGAAACCAT ACTGGCCGGT GCTCGCCGGG GGCACCGCTT CACCCTTGTG
CTGCACGCCG GACAGGCGGC CCAGTTCCGT TGCCTGGGGT GGGACAGTCT GCATACCTCC
ATCCGGCTGC GCGTCCTGTC GCGCCTGATG CCACAGCGCG CCCTGCGCCG CGTCTGCGAC
GATTATCCGG AGATGATCAG GGTATCGGAC GCAGCCGGAT CCGGTTTTGG CGAGGGTGCA
GCGCTGCTCC CCTTCGGCGA CATGGCCCGC GATCTGGATT TCCCCGACAA CGCCCACTAC
GGGAGGAGTG CCCATGCTTG A
|
|---|
| Protein sequence | MPSPSIDIIV PVWNSPFQAR ACLSAILTHS PGVRLIIVDN GSDRQTQLVL EEFSEPLGEN
CLFISSDRNL GLVPAINMGL SRSDGDCAVI VRPHVTVSEG WLEGLVEAAD AGLASPLFSG
PGAPFPPPLA RGCSRMETFD VSFSTLALRT ELYMLLGGFD EKLDGGQWCL HDYVSRAASR
GYRTCVTSAS TVVCAVAPVL GSDARRRELV QASRNRCIER WGEGRHYGVY FGRGVAAESL
ADAIETILAG ARRGHRFTLV LHAGQAAQFR CLGWDSLHTS IRLRVLSRLM PQRALRRVCD
DYPEMIRVSD AAGSGFGEGA ALLPFGDMAR DLDFPDNAHY GRSAHA
|
|---|
| |