| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3460 |
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| Symbol | |
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| ID | 4572069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3819772 |
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| End bp | 3822957 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639757519 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_903110 |
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| Protein GI | 118581860 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAA GAATCAACAA AATCAACCGA CCGCTGCTGA CGGATATCGT GCCGCGCGAA
CGGCTGTTCC GCCTGCTGGA CGGTGCCCTG AAAAGGCAGG TTGTCTGGGT GCACGGCCCC
GGAGGTTCGG GAAAGTCCAG CCTTGTGGCA AGCTACATTG ATTCCCGCGC CCTTCCCTGT
CTCTGGTACC AGGTGGACAG GGGCGATCAG GACGTTGCCA CACTCTTCTA TTACCTTGGC
ATGGCCCTGG AAAATGCCGG TTTTTCCACA GAGGCGCCCT CCCTTCCCCT GTTGACACCC
GGCCAGCATC CTGAACTGGA ACTCTTCGCT AAACGCTATT TCGAGAGACT GTTTGCCGCG
CTTCCCTCCT CCTGTGTACT GGTTTTTGAC GACTGCCACG AAGTGGCCGA TGACTCCCTG
TTTCACCGGA TTCTGCGAAA CGGCCTCTAT GAGATCCCCG ATGGAATCCA TGTCGTTGTC
ATCAGCCGCA ACGCGGTCCC TTCCTCCCTG ATCCACCTTC GATCCCGCAG CATGCTGAAC
ACAATCAGCT GGAGCGCCCT CCGTCTGACA CCCGCGGAGA CGGAGGCGAT AATCCGCGCG
CGAAGGGCAG ATCACGTCGA CCGGGAGGAT GCACGGCGAC TGCACGAGAG GATTCAGGGC
TGGGTGGCTG GACTGGTGCT TGTCCTCGAA GGGGGATATG CCAACATATC CGACGCCGTG
CCTGAAATGC AGCCGGTGCA AGAGGTGTTC GACTATTTCG CCGCTGAACT GTTCGCCGGC
ATGGATGAGG CAACGCAGAT TTTCCTGCTC AAAACAGCCG TCTTCTCCGA GGTCGCGCCG
TTCCCCGCGC AAAGGCTCAC GCAGCAGCAC GATGCCGGGC GCATCCTCTC CTGGCTGTAT
GAAAAGAACT GCTTCACCGA GCGGCGCTAC GAGGGGGGCT CGATGTACCG TTACCACCCC
CTGTTCCGTG AGTTCCTGCT GGAGCGCGCC TGCCAGTTCT TTTCTCCTGA CGAGATGCGC
GGCATCCGGC ACACCGCGGC AATCGCCCTG GAGGAGTCGG AGCGCCAGGA AGAGGCCACG
GAGCTGTTTA TGGCAGCCGC AAGCTGGCAG GATGCTGCGC GGCTGATCAT TCGCATCGCC
CCGGCCTATC TGGCCCAGGG ACGCGGCAAG ACCGTGCAGC AATGGCTGGA GCGTCTGCCC
GAAGAACTGG CACAGAGGCA TCCCTACCTC CCCTTCTGGC AGGGAGCCTG TCGTCTACCC
GAAGCACCCC TTTCCGCTTT CACCGATTTC AAGCGCGCCT ACCAGATTTT CCAGCAGCAC
GACGACAGGG TCGGCATGTG TCTCTCCTGG GCGGCCGGCG CCAATGCCAC GCTCTACTCC
GATTCCATCT ATCATGAGTG GATACCGGAG ATGGAGTCGT ACATGCGCCA GTATCACGTC
TTTCCTTCCC CGGAGATCGA GGCGCGGGTC ATTACCAGCA TGTTCAATGC CATGTCTTTC
CAGCAGCCCG ACCATCTCCG CATCAGGGAA CTGGAAGAGC AAAGCTACGG ACACTTCTGG
CAAGAGCATT GTCTCGATTC CGACGCACGG CTAAAAACCG GCGTGTATCT GGCGGTTTTC
AACCTCTGGT GCGGTGAGAT ACAGAGGGCC AGCCTCATCG CCGACAGGCT CGATCTTATC
TCGCAAGCCG CCAGCGTATC CGACCTGACC AGCTTTACCA TCAAGACCAC CCAGGCCCTG
GTGGACTTCT TCACCGCTTC CTTCGGCGCC TGTCGCCAGC GAGTCTTCGA GGCGCTCCAG
CTGGCCGAAG AGACGGGTAT CCGCGCCTTG TACCTGCACG TCATGGGACA TGGGCTCGCC
GCGGCCCTGA GTGACGGCGA CCTGGATACC GTGGACACGC TGCTGGCCAG GATGCGGGAC
AACCTTGACC GGGCCGGAGA GTTGGACCAG GCCTACTACT ACTTTTGCCT CGCCTGGCGG
GCGAGACTGG AGGGCGATCT GGAGGGGGCC TTCCACAACC TGGCCATAAC CTCCCCCTTC
ATGGAAAGCG TTGATAACCT TCCCTCCCAC GCCATCGCCC ACATCGCCCT TGCCGAACTG
TACTGTCGGC GAGGGGACGG GAAGGCTGCC CAGGGGCATG TGGCCCTGGC ACGCCAGTTC
GGGGAACGGC TGCGCAGCCA TGTGGTGGAG TTCATGTGCC TGCTGCTGGA GGCGGACCTC
AATCTGGAGC AGGGACGGGC AGGGGAGGGG ATCGCCTGTT TGCGAGCGGC TCTGGCCCTG
GGAAGAAGCC ATGGCATAGT CAACATGTAC TGGTGGCAGC CGGACACCAT GGTCCGGCTC
TGCATGAGAG CCCTGCGGGA GGGGATAGAA GCCGGGTATG TCAGTGCCCT GATCCGACGT
CGTGGCCTCG TTCCGCGAAC TCCGCCCCTT GACATGGAGG AATGGCCCTG GCCGGTGAAG
GTGTATACCC TGGGGCGTTT CGAACTGCAC GCCAATGGCA ATCCGGTACT GTTCAGCGGC
AAAGTGCAGA AGAAGCCACT GGAAATGCTC AAGGTCCTGC TTGCACTGGA AGGCAAGGAG
TCACATGAAG GGCAGATTGC CGACCTTCTC TGGCCCGAAG CAGAGGGAGA CACGGCCCGA
AAATCGCTGA AAAGCACCCT GCACCGCTTG CGTGACCTGC TGGGAAACGA GAAGGCGGTA
CTGATGCGCG AGGGGAGGCT CATTCTGGAC CGTTACCAGG TTTGGACGGA TGTCCTTGCC
TTTGAAGAAC TGCTGGCCAA GGCCCGGGTG AAAAAGGATG CCGCCGATGA GGCGGAAGCC
ATCCGCCTGA CCGAGAAGGC TCTTGCCCTG TATCGTGGCC ACTTCCTCGA TCAAGTAAGT
GACACCCCCT GCATCATTGC CCTGCGAAAC CGGCTTCAGG GGAGGTTCAG GAATGCAATC
CTCGCCCAGG GGAACCTGTG GCGCGACAGG GGGGACCTGG ATCGGGCCAT GGAGTGCTAT
CTGAGGGGAG TGGAGGTTGA TGACCTGGCA GAGGAGTTGT ACCGCAACCT GATGTCATGC
TACCTGTCGG CAGGCCTGCG GGGGGAACTG CTGACCATGT TCCGGAACTG CGGCGATGCT
CTGGCCCTGC ACGGGCTCTC CCCCTCACGG GAAACCGTGG CACTCTACAG ACAGGCATTC
CTCTGA
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| Protein sequence | MNLRINKINR PLLTDIVPRE RLFRLLDGAL KRQVVWVHGP GGSGKSSLVA SYIDSRALPC
LWYQVDRGDQ DVATLFYYLG MALENAGFST EAPSLPLLTP GQHPELELFA KRYFERLFAA
LPSSCVLVFD DCHEVADDSL FHRILRNGLY EIPDGIHVVV ISRNAVPSSL IHLRSRSMLN
TISWSALRLT PAETEAIIRA RRADHVDRED ARRLHERIQG WVAGLVLVLE GGYANISDAV
PEMQPVQEVF DYFAAELFAG MDEATQIFLL KTAVFSEVAP FPAQRLTQQH DAGRILSWLY
EKNCFTERRY EGGSMYRYHP LFREFLLERA CQFFSPDEMR GIRHTAAIAL EESERQEEAT
ELFMAAASWQ DAARLIIRIA PAYLAQGRGK TVQQWLERLP EELAQRHPYL PFWQGACRLP
EAPLSAFTDF KRAYQIFQQH DDRVGMCLSW AAGANATLYS DSIYHEWIPE MESYMRQYHV
FPSPEIEARV ITSMFNAMSF QQPDHLRIRE LEEQSYGHFW QEHCLDSDAR LKTGVYLAVF
NLWCGEIQRA SLIADRLDLI SQAASVSDLT SFTIKTTQAL VDFFTASFGA CRQRVFEALQ
LAEETGIRAL YLHVMGHGLA AALSDGDLDT VDTLLARMRD NLDRAGELDQ AYYYFCLAWR
ARLEGDLEGA FHNLAITSPF MESVDNLPSH AIAHIALAEL YCRRGDGKAA QGHVALARQF
GERLRSHVVE FMCLLLEADL NLEQGRAGEG IACLRAALAL GRSHGIVNMY WWQPDTMVRL
CMRALREGIE AGYVSALIRR RGLVPRTPPL DMEEWPWPVK VYTLGRFELH ANGNPVLFSG
KVQKKPLEML KVLLALEGKE SHEGQIADLL WPEAEGDTAR KSLKSTLHRL RDLLGNEKAV
LMREGRLILD RYQVWTDVLA FEELLAKARV KKDAADEAEA IRLTEKALAL YRGHFLDQVS
DTPCIIALRN RLQGRFRNAI LAQGNLWRDR GDLDRAMECY LRGVEVDDLA EELYRNLMSC
YLSAGLRGEL LTMFRNCGDA LALHGLSPSR ETVALYRQAF L
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