| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3258 |
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| Symbol | |
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| ID | 4571753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 3579668 |
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| End bp | 3581470 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639757317 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_902909 |
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| Protein GI | 118581659 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0680122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTGA GCCGGCAGCT GCCGCTCAAA ACAGGGGCAC AGAGGAGTCC GGATATGAAT
AGCATCACCG GAAGGCCGAG GCTGAAGCAG CTTGTCATGC TCTTCTCCAC CGCATGCATG
ATTCTGCTCG TCACCGTGAC AACTGCAATC GCCGCACCGG CACAGAAAAA AACCGTCGAT
AAGGAGTCGC CAGCGATCCA GGCCGTTCCG GTGCCCGTTC CCGAGGCCCA GGTCGAGCTT
GACGGCAAGC CGCTGTTCCC CATCAAGACC AAAGTCCTCT CCCTGCTGCC GGAGGAACGG
GCCAAAACCA TATCGATACG GCTGCTCAGG CTGGTCAAAA ACCCCCTGTT CCACCTGGAT
TCCCTGAAGG TCGTTGACAA CGACATCACC AGCGATATCG TTTCAGACGA CCTGATTATC
ATGAGCGTCA GCGAGGCCGA TGCCCTGGCC GAGGGGAAGC CGCGTCCCCA GCTGGCCCGG
GAGTTCGCCG GGAAGATCCG CGCCGCGATG GAGGCACGCA ACCGGGAGTA CAGTACCCGC
AGCCTGCTGT TCGGCGCGCT GTACACGCTG CTGTCCACCC TGGTGCTGAT TGCCACCCTC
TCCCTGATCC GCCGCTTCTT TCCCCGCCTG ATCGCCAACA TCCACTCCTG GCGCGGCAGC
TACATCCGCT CCATACGCAT CCAGTCCATC GAGGTGCTTA ATGAAGAGCG GATAGTCGCG
CTGATCACCT CGATCCTGCG TAGCATCCGG CTGCTGCTCC TGCTGGGGCT GTTCTACCTC
TACATCCCCC TGGTGCTGAG CTTCTTCCCC TGGACACGGG GTATGGCCTC GAAGCTCTTC
GACTACATTC TGACCCCCCT GGAGAAGCTG TTTCACGCTG CCGTCTCCTA CCTGCCCAAC
ATCTTCTTCC TGCTGGTCAT CCTGGCTATC GCCCACTACA CTATCCGGCT CACCCGCTTC
ATATTTTCCG AGATCGAGAA GCAGACCATC AGCATCCCCG GTTTTTTCCC GGAGTGGGCC
GATCCCAGCT TCAAGATAAC CCGCTTTTTG ATCCTGGCCT TCGCGGCCGT GGTGGCCTTC
CCCTACCTGC CCGGTTCCGG ATCGCCGGCA TTCAGGGGGG TATCGGTCTT TCTGGGGGTG
CTCTTCTCCC TGGGATCGAC ATCGGCCGTG GCCAACGTGG TGGCAGGGGT AATCCTGACC
TACATGCGCG CCTTCAAGCT GGGTGACCGG GTCAAGATCG CCGACACCAT GGGTGACGTG
GTGGAGAAGA ACCTGCTGGT GACCCGCGTG CGCACGATCA AGAACGTGGA TATCACCATC
CCCAACGCCA TGGTGCTGGG GAGCCATGTC GTCAACTACA GCTCGTCATC CCAAAACTAC
GGCCTGATCC TCAACACCAC GATAACCATC GGCTACGACG CCCCCTGGCG CCAAGTCCAC
GAACTGCTGA TCTCCGCCGC ACGAGCCACC GGAAACATAC TGGAACTGCC GGCCCCCTTC
GTGCTTCAGA CCGCCCTCAA CGACTTCTAT GTCAGCTACG AGATCAACGC CTACACCGAC
AAGCCGTCGG TCATGGCGCG CACCTATTCC GAACTGCACC AGAACATCCA GGACGCCTTC
AACGAGGCGG GGGTCGAGAT CATGTCGCCG CACTACTCCA CGCTGCGCGA CGGCAACCGG
ACCACCATCC CCGATGCCTA CCTGGCCAAG GACTACCGGG AGCCCTCTTT TCGTGTTACA
AGGGTGGCTG GAGAACGGGG TGGGGAATCC CGGGCCACGG AAGGAAAGGG GGTGCGCGGG
TGA
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| Protein sequence | MRLSRQLPLK TGAQRSPDMN SITGRPRLKQ LVMLFSTACM ILLVTVTTAI AAPAQKKTVD
KESPAIQAVP VPVPEAQVEL DGKPLFPIKT KVLSLLPEER AKTISIRLLR LVKNPLFHLD
SLKVVDNDIT SDIVSDDLII MSVSEADALA EGKPRPQLAR EFAGKIRAAM EARNREYSTR
SLLFGALYTL LSTLVLIATL SLIRRFFPRL IANIHSWRGS YIRSIRIQSI EVLNEERIVA
LITSILRSIR LLLLLGLFYL YIPLVLSFFP WTRGMASKLF DYILTPLEKL FHAAVSYLPN
IFFLLVILAI AHYTIRLTRF IFSEIEKQTI SIPGFFPEWA DPSFKITRFL ILAFAAVVAF
PYLPGSGSPA FRGVSVFLGV LFSLGSTSAV ANVVAGVILT YMRAFKLGDR VKIADTMGDV
VEKNLLVTRV RTIKNVDITI PNAMVLGSHV VNYSSSSQNY GLILNTTITI GYDAPWRQVH
ELLISAARAT GNILELPAPF VLQTALNDFY VSYEINAYTD KPSVMARTYS ELHQNIQDAF
NEAGVEIMSP HYSTLRDGNR TTIPDAYLAK DYREPSFRVT RVAGERGGES RATEGKGVRG
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