| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3180 |
|---|
| Symbol | |
|---|
| ID | 4573282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3495453 |
|---|
| End bp | 3496844 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639757239 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_902831 |
|---|
| Protein GI | 118581581 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTG ATCTTCTGTA CGGCCTTCTG CCGGAACACA TCCTCTTGGG CCTGATCCTG
GTCCTCATGC TGCTGGAGAT ACTCAGCGTT GACAAGCGTG CCGGCAGCGC CCTGTTCATC
GCCTCGCTCC TGGCCGGCGC CGGCGTCCTG GTCATGCAGC TTCAAACCGG GTACACTGCC
GACATCGTCA TGAATGAGAT CCGCATCGAC CGCTTCTCCG AGATCGGCCG CCTGATCATC
GTAAGCTGCG GCGCCATCCT GGGGGTCTAC TCCCTCTCCA GCGAAGCGGG GCACAAATAC
TGGATCCTCA TCGCCTCATC GCTTCTGGGC GCCATGATCA TCCTGGACAG CGCCGGCTTC
ATCTCGCTCT TCATGGGCAT CGAGATCCTC TCGCTCCCCG GCTTCGCCCT GATGGTCCTG
AACAACGGTA AATCAACCGC CTCCGAAGGC TCCATCAAGT ATCTCCTGCT CTCCTCCGTG
GCCACGGCAC TGGTCCTGTT CGGACTCTCC TTGGTGTACG GCTCTACCGG CAACCTGAAC
ATCAGTTCCT TCACCGCAGC CGTCGCCACC GGCGGCGTGC AGAACCTGGC CGCCAGCGTC
ATGATCCTCT CTGGCTTCTT CCTGAAAGCC TCCGTGTTCC CCTTCCACGG CTGGGCACCC
GACGCCTACT CCAGCGCCCG TCTGCCGGTA ACGGCTTTCC TGGCCTCCAT CGTCAAGGCC
GCCGTGGTGC TGGGCCTGGT GCGCATCCTG GGCAACGCCG TACTCAACCC GGAAGCGGTC
ACCGTGATTG CGCTCCTCTC CATGCTCTCC ATGTTCTACG GCAACATCAC CGCCATCCAC
CAGACCGCCT TCAAGAAGAT GCTGGCCTAC TCCTCCATCT CCCACGCCGG CTACATGATG
TTCGCCCTGG TTGACAACAC CGGAGCCAGA ACCGAGGCGC TTCTGTACTA CGTGGCCGTC
TACGCCGTCA CCACCATCAC CGCCTGCGCC TGCTTCAGCA TCTTGAGCGG CGAGGACGAC
AACCTGGACA ACCTGAACGG CATCTTCAGG AAGAAGCCGG TGGCCGCCAT CCTGCTTTCC
CTGTGCGTAC TCTCCCTGGC CGGCATCCCG CCGCTGCCAG GCTTCCTGGC CAAGTTCTTC
GTCTTCAAGA CCGTCATCGC CTCCGGTCAC CTGACCGCCG CCGTCCTGGC CTTCGTTGCC
AGCTACATCG GCACCTTCTT CTACCTGGGC GTGGTGCTGC GGATGTTCCG CTCCGACGCC
GAAACCGTGG AGCAGCCAGC CAACGCCACC TGCCTCTGCT GGACCTGGGG CGGAGCGCTC
CTGGGTACCC TGGCCCTGGC ACTGTTCATG CTGCTGCCCA ATATCTTCCA CTGGGTGATG
GCGGGAATCT AG
|
|---|
| Protein sequence | MATDLLYGLL PEHILLGLIL VLMLLEILSV DKRAGSALFI ASLLAGAGVL VMQLQTGYTA
DIVMNEIRID RFSEIGRLII VSCGAILGVY SLSSEAGHKY WILIASSLLG AMIILDSAGF
ISLFMGIEIL SLPGFALMVL NNGKSTASEG SIKYLLLSSV ATALVLFGLS LVYGSTGNLN
ISSFTAAVAT GGVQNLAASV MILSGFFLKA SVFPFHGWAP DAYSSARLPV TAFLASIVKA
AVVLGLVRIL GNAVLNPEAV TVIALLSMLS MFYGNITAIH QTAFKKMLAY SSISHAGYMM
FALVDNTGAR TEALLYYVAV YAVTTITACA CFSILSGEDD NLDNLNGIFR KKPVAAILLS
LCVLSLAGIP PLPGFLAKFF VFKTVIASGH LTAAVLAFVA SYIGTFFYLG VVLRMFRSDA
ETVEQPANAT CLCWTWGGAL LGTLALALFM LLPNIFHWVM AGI
|
|---|
| |