| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3164 |
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| Symbol | |
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| ID | 4573354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3473333 |
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| End bp | 3475405 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639757223 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_902815 |
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| Protein GI | 118581565 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.625689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCC ATACGATTTC CCCCCCATCC AGGCACCACG GCAACAGCAC AGCTCCGGAA
GCGCTTCCGG CGAATCGGAG TCAGCAGCCG AACCTGGGCA GCGGACTCCC TCCTTTCGAA
TTGCAAGCGG GGCCACACGC CATCCACGGC CGGGAGAAGT CATATTCCCG GAGCTACATT
CAGTTCCGTC GCCAGGGGGA GCTGCAGGCA CTGAACAAGG AGTTGCAGGC GGCCACCAGC
GACTTGCGGG AGGCGAACCG GAAGCTCGGC CAACGAGTTT TGGAGCTGGA ACGGAGGAAT
CGGGAATCAG CCCATCAGGC CAATGGGTAC CTGCCGGGAA ATGACCGGAG CATAGGCAGC
ATCATTATCG ACCCGCACCT GCGAATCGGC GTCTTCAATC CGGGCTGTGC CCGACTCTTC
AGGCTGCGGC CTGAAGATGT GGGCCAGCCT GTAGACCGCC TCACCCGCAC CATCTGGGAC
CGGGATGAGT TCTTGAGCGA CATCCTGGCG GCATTCCAAA ACGGTCTCCC CATCACGCGG
GAAACCCGCC GCGGCAGGGA GTCATGGTTG TTGGCCCATC TGGCCCCCGC ATACGACCTG
AAGGGCCGGG TGGAGGCGCT GATCGTCTAC TTCAGCGACA TTTCCCCATT CAAACAAGAG
CAGGAGCGCA ACCGGCTCCT GGCGCGGATG TTCCAAGAGA GCAACGAGGC GCAGCTCATA
ACCGGCGCCG ACGGCCGGAT CATGGGCAGC AACGACAGCT TCAGCCAGCT GACCGGTTAC
ACGGGTGAAG AGATTGTCGG CCGCACCACC CGGCGACTGC TGGCTGGCCA AAAATCGAAG
GAGCTCTTCG CGACGCTGGC CGAAGCGCTG CGCAGTGGAA ACCCCTGGCA GGGAGAGCTG
CACATCAGAA ACAAGGACGG AAATGTCCTT TCCACCTGGA CAACCGCAAC CCCCCTGAGA
GACGAACGAC GGAAAACAAT CAACTACACG GCCACGTTAC TCGACGTTGC CGCTCGGGCA
GGACGCGAAC AGGACAACGA GTACCGGGCC AACCACGACG CACTGACCGG ACTCCTCAAC
CGCTTCAGCC TGATGCAGCG CCTGGCTCAA TCGCTGGAGC AGGCCAGGAG CGACGAGCAC
CACTTTGCGG TCCTGTTCAT CGACCTGGAC CGCTTCAAGG AGATCAATGA CTCCCTGGGG
CACCACATGG GGGACCTGCT GCTGGTCGAG GTCGCCGCCC GCCTGGTTGC CGCGGTACGC
GCCTCCGACA TTGTTGCCCG GCTGGGCGGT GACGAATTCG TGGTAGCGAT GCCCCACATC
CGGTCCGCCA TCGATCCGGC CTTTCTGGCG GACAAGATAC GGCGCGCCAT CTCGCAACCT
TTCCTGCTGG AGGGACACGA ACTCCTCACC ACCCCCAGCA TCGGCATCAG CGTGTTTCCC
GATGATGGAG GAAACGTGGA GGAATTGCTC AAGAATGCCG ATACCGCCAT GTACCACGCC
AAATCCCGGG GGCGGAACAA CTACCAGTTC TTCATGCGGG AGATGCACGC CATCACCCGG
GAGCGCCTCC TGCTTGAACA TGACCTGCGC CTGGCGGTGG AACGCAACGA GTTTATCCTG
CACTTTCAGC CGCAGATTGA CCTTGCGACC GGTTTGGTGA TAGGTGTGAA GGCCATGCTG
CGCTGGCGGC ACCCCCTGCG CGGCATCATC ACCCCCGACA GGTTTATCTC CACTGCCGAT
GCCTCGGGAC TGATCCTGCG CATCGACCAT CTCAGCCTGG AGATGGCATG CCGTCAGCTG
GCGGCCACCA TCTCCCTCGC CCACAGCATC GGCACGCAGG TTGCCGCCAA GGGGATCGAA
GCGGAGGCTC AGCTGAACCT GCTTGCCGCT CAACGGTGCG ACGTGGGACA GGGATACCTT
TTCAGCCGTC CCCTTGCGGC GGACAGAATC GTGGAATTTA TTCGCCGCCA TGCCGGCCGG
GCGGTGTGGG AGCGAAACGG AACACCCCCG GGGATGGTGG CTGCTCCGTT TCTGGCGGAA
ACAGCGCCAG CAACCTTCAG CTCAGGAGAG TAG
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| Protein sequence | MQRHTISPPS RHHGNSTAPE ALPANRSQQP NLGSGLPPFE LQAGPHAIHG REKSYSRSYI
QFRRQGELQA LNKELQAATS DLREANRKLG QRVLELERRN RESAHQANGY LPGNDRSIGS
IIIDPHLRIG VFNPGCARLF RLRPEDVGQP VDRLTRTIWD RDEFLSDILA AFQNGLPITR
ETRRGRESWL LAHLAPAYDL KGRVEALIVY FSDISPFKQE QERNRLLARM FQESNEAQLI
TGADGRIMGS NDSFSQLTGY TGEEIVGRTT RRLLAGQKSK ELFATLAEAL RSGNPWQGEL
HIRNKDGNVL STWTTATPLR DERRKTINYT ATLLDVAARA GREQDNEYRA NHDALTGLLN
RFSLMQRLAQ SLEQARSDEH HFAVLFIDLD RFKEINDSLG HHMGDLLLVE VAARLVAAVR
ASDIVARLGG DEFVVAMPHI RSAIDPAFLA DKIRRAISQP FLLEGHELLT TPSIGISVFP
DDGGNVEELL KNADTAMYHA KSRGRNNYQF FMREMHAITR ERLLLEHDLR LAVERNEFIL
HFQPQIDLAT GLVIGVKAML RWRHPLRGII TPDRFISTAD ASGLILRIDH LSLEMACRQL
AATISLAHSI GTQVAAKGIE AEAQLNLLAA QRCDVGQGYL FSRPLAADRI VEFIRRHAGR
AVWERNGTPP GMVAAPFLAE TAPATFSSGE
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