| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2413 |
|---|
| Symbol | |
|---|
| ID | 4572244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2612117 |
|---|
| End bp | 2612566 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639756464 |
|---|
| Product | type II secretion system protein G |
|---|
| Protein accession | YP_902077 |
|---|
| Protein GI | 118580827 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.330838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGTGCGG CTAGGGGCGG TTTTACCCTG ATCGAGCTGA TGATCGTGGT GTCCATCATC
GGTATCCTGG CGGCCATTGC CGTACCCCAC TACCAGTGGA GCGTGATCAA GGCCCGCGAG
GCGGTGCTGC GGGAGGACCT GTACAACCTG CGCAGCGTGA TCGACCAGTT CTACGCGGAC
CAGGGCAAGT ACCCTGATGC GCTGACTGAT TTGTCCGACA AGCGTTACCT GCGCGACATT
CCCAAGGATC CCTTTACCGG CAAGAACGAC AGCTGGGTGA CGGTTGCGCC CCCTCCGGAG
GGGGCCGCTC CGGCGGAGGA GGGGAGCAGT TCCCCCTTGG TGGACGTACC TGGCGCATCG
GGAGCCTCCG CCGGGTCGGG AAATGTGTAC GATGTGCACA GCGGTTCCAA CCTGGTGGGG
AGTAACGGAG TACCTTACAA TGAATGGTGA
|
|---|
| Protein sequence | MRAARGGFTL IELMIVVSII GILAAIAVPH YQWSVIKARE AVLREDLYNL RSVIDQFYAD
QGKYPDALTD LSDKRYLRDI PKDPFTGKND SWVTVAPPPE GAAPAEEGSS SPLVDVPGAS
GASAGSGNVY DVHSGSNLVG SNGVPYNEW
|
|---|
| |