| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2404 |
|---|
| Symbol | |
|---|
| ID | 4572235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2602633 |
|---|
| End bp | 2603526 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639756455 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_902068 |
|---|
| Protein GI | 118580818 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0620494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGA AAGCATACCT GAAAGAGCAG TGCGCCCGCG TAGATGCGGC GCTGGACAGC
TACCTCCCCC GGGAGACGGA ACTCCCCCAC AGCCTGCACA AGGCCATGCG CTACTCGGTC
TTCGCCGGCG GCAAGCGGGT GCGCCCGATT CTGATGCTGG CCGCCTGCCA GGCCGTGGGA
GGTGATACGG AGGTGGCCAT CCCGGCTGCC TGCGCCATGG AGATGATCCA CACCTACTCC
CTGATCCATG ACGACCTGCC TGCCATGGAC GACGACGATT TCCGGCGCGG CAACCCCACC
AATCACAAGG TGTTCGGTGA GGCCGTGGCC ATTCTGGCCG GCGACGCGCT CCTGACCGAG
GCGTTCAAGT TGCTCTCCAA TCCGGCCTGC GCGGCCGGCG TGCCGTCCGA GGCTCGTCTG
GCGGTGATCC ACCAGATCGC CTCCTGCGCC GGTTCCCACG GCATGGTGGG GGGGCAGGTG
GTTGACATGG AGAGCGAGGG GAAGAGCGAC ATCGACCTCC CCACGGTGCA GTACATCCAC
ACCCACAAGA CCGGCGCCCT GATCAAGGCG GCCGTGGTGG CTGGCGCCCT TTTGGGCGGC
GCGGACCGGG AGAAACTGGC CGCCATAACC CGTTACGGCT CGGCAGCAGG TCTGGCCTTC
CAGATCGCCG ACGATATCCT GGACATCGAG GGGACCACCG AAGAGATCGG CAAGGACGCG
GGAAGCGACC AGGCCCGCGG CAAGGCCACC TATCCGGCGG TGATGGGGCT TGCGGCAGCC
AAGCAGGAAG CCACAACCAT GATGGACGAA GCCTTCAAGG CGCTGGAGAT CTTCGGCAGC
GAGGCCGATC CCCTGCGGGA AATCGCACGC TATATCGTCA CGCGCAAGAA GTAG
|
|---|
| Protein sequence | MDLKAYLKEQ CARVDAALDS YLPRETELPH SLHKAMRYSV FAGGKRVRPI LMLAACQAVG
GDTEVAIPAA CAMEMIHTYS LIHDDLPAMD DDDFRRGNPT NHKVFGEAVA ILAGDALLTE
AFKLLSNPAC AAGVPSEARL AVIHQIASCA GSHGMVGGQV VDMESEGKSD IDLPTVQYIH
THKTGALIKA AVVAGALLGG ADREKLAAIT RYGSAAGLAF QIADDILDIE GTTEEIGKDA
GSDQARGKAT YPAVMGLAAA KQEATTMMDE AFKALEIFGS EADPLREIAR YIVTRKK
|
|---|
| |