| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2031 |
|---|
| Symbol | |
|---|
| ID | 4574228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2180689 |
|---|
| End bp | 2181759 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639756077 |
|---|
| Product | twitching motility protein |
|---|
| Protein accession | YP_901697 |
|---|
| Protein GI | 118580447 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
|---|
| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.517106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA ACATACTGCA CCAGATCCTG GAAATCGCCT TTCAGAAACG GGTTTCCGAC
CTCCATTTCG AGGTCGACAA TCCCCCCTTT TTCCGGGGAC GCGGGCAACT GATCCGCTCC
AAGATGCAGA ATCTGACCCC CGGGGACACG GAGTTCATAG CAGCACGCGT CCTGGAGCAG
AACAATCGCC AGATCAATAG TGATTTCAAG GAACTTGACG CGTCATACGC TTTACCCAGC
GGAGGGCGCT TCCGTGCCAG CGTCTTCAAG CAGCGCGGAC ACTTCGGCAT CGTCATGCGT
GTCATCCCTC CCCACGTCAG TACCTTCCAG GAGCTGAACC TGCCGCCGGT GCTGGAGGAG
ATTGCCAAGG CGCCCAACGG CCTGATCCTG GTCACCGGCC CCACCGGTAA CGGCAAATCC
ACCACCCTGG CAGCCATGAT CAGATGCATC AACGAACACA ACAACTACAA CATCATAACC
ATAGAAGATC CCATTGAATT CCTCTTCACC TCCCAGAGGA GTTGCATCAT CCAGAGGGAG
GTCGGCATCG ACACCGCCAG CTTCAACAGC GCCCTGAAGG CGGCTCTGCG CATGGATCCG
GATGTAATCA TGGTGGGAGA AATGCGCGAC ACGGAAACCA TCGACGCCTG CATCAAGGCG
GCGGAGACCG GCCATCTGGT CCTGACCACC CTGCACACCC AGGGTGCCGT CTCCACCATA
AACCGCATCG TGGGCAACTT CCCGCCCGAC ACGCAGGAGA TCATCCGCCA GCGGTTGGCC
GATATCCTCG TGGCCACCAT CTCGCTGCGA CTGGTAAAGG ACAAAACCGG CGAGAGCATC
CTGCCGGTGG TGGAGATCAT GCGCGCCACC ACGACCATCC AGGCCTGCAT CCGCGAGGGG
CGGCTGAGCG AACTGGAAAA GCATATCGAA AACGGCAGTT CCCAGTACCA GATGCAGTCT
TTGGACCAAC ACCTGCTGCA GCTCTACAAA CAGGGGCAGA TCACCATCGA GGATGCCAAG
CGTCTGACCC ACTCCATGGA CCTGGAACGG AAGCTTATGT TCGATTCATA G
|
|---|
| Protein sequence | MDINILHQIL EIAFQKRVSD LHFEVDNPPF FRGRGQLIRS KMQNLTPGDT EFIAARVLEQ
NNRQINSDFK ELDASYALPS GGRFRASVFK QRGHFGIVMR VIPPHVSTFQ ELNLPPVLEE
IAKAPNGLIL VTGPTGNGKS TTLAAMIRCI NEHNNYNIIT IEDPIEFLFT SQRSCIIQRE
VGIDTASFNS ALKAALRMDP DVIMVGEMRD TETIDACIKA AETGHLVLTT LHTQGAVSTI
NRIVGNFPPD TQEIIRQRLA DILVATISLR LVKDKTGESI LPVVEIMRAT TTIQACIREG
RLSELEKHIE NGSSQYQMQS LDQHLLQLYK QGQITIEDAK RLTHSMDLER KLMFDS
|
|---|
| |