Gene Ppro_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2012 
Symbol 
ID4572683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2160964 
End bp2162316 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content63% 
IMG OID639756058 
Productdeoxyribodipyrimidine photolyase 
Protein accessionYP_901678 
Protein GI118580428 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID[TIGR00591] photolyase PhrII 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAGCCG TGGACATCCG GCGCATACAC CCCCTGAACA GGCGGGAAGG GCAGGACGGC 
CCGGTGGTTT ACTGGATGAG CCGAGACCAG AGGGCAATGG ACAACTGGGC CCTGCTCCAT
GCCCAGGAAC TGGCCTTGGA ACGGCGGGCG CCGCTGGTGG TGCTCTTCAC TCTGGCCCCT
TCCTTCCTGG GAGCGACGCT CCGGCAGTAT GGCTTCATGC TGAGGGGGTT GGCGGAGACT
GCTCAACTGC TGGCAAAGAT GAACATTCCC TTCTACCTGC TGCGGGGGGA GCCGGTGGGA
CAGCTCTGTT CGTTCGTGGA ACGGAATCGG GTCGGCACCG TTGTCACCGA CTTCGATCCC
CTGCGTGTCA AGCGGGTCTG GCGCGAAGGG GCGGCCCGCT TGTGCGGGGT TCCCTTTTTC
GAGGTGGATA GCCACAACAT CGTCCCCTGC CGTTTCGTCT CCGATAAACA GGAGTATGGT
GCCCACACCC TGCGACCGAA GCTTCGGCGC CTGCTCGCCG ACTTCCTGCA TGAGTTTCCC
CCCCTCATCC CCCATCCCCA TGCCTGGCCC GTCCCGTTTC AACCCCTCGA TCCCCAAGGC
ATTCTCTCCG ATCTGTACAT GGACAGGAGC GTGTCAGAGC TGAGCAATCC CCTGCCGGGA
ACAAGGGCCG CCGGTGAACG GCTGCGGAGC TTCATCGCCC AGGGTCTTGA AGACTATGGT
CTCCGGCGTA ACGATCCCTG TTGCGACGGC CAGTCGGAGC TCTCCCCCTG GCTGCACTTC
GGCCAGCTCG CTCCCCAGCG GGTGGCCCTG GAAACAGTGC GCACTCTCTC CGGCTCGCCA
TCCAGCGAGG CGTTTCTGGA TGAACTGATC GTGAGAAGGG AGCTGTCGGA CAATTTCTGT
CTCCATAACC AGGCCTATGA CCGTCTGGAG GGATTTCCCG CCTGGGCGCT GAAGACCCTC
GGGGAACATC GCCACGACCG GCGCGAGTAC CTTTATACGC AGGAACAGTT CCAGGACGCC
GAGACCCATG ATCCGCTCTG GAATGCGGCC CAGCGTTCCC TGCTGCTGGG CGGGAAGATG
CACGGCTACC TGCGCATGTA CTGGGCCAAA AAGATCCTGG AGTGGAGCGC CTCGCCGGAA
GAGGCGCTGG CGGTCGCCAT CCGGTTGAAC GACCGCTACA GCCTGGATGG CCGCGACCCC
AACGGCTATG CCGGCATCGC CTGGAGCATG GGGGGGGTGC ATGACCGCGC CTGGGGTGAA
CGGCCGGTCT TCGGCAAGAT CCGGTACATG AACGACAGGG GGTGCAGACG CAAATTCGAC
GTCGACGCCT ATATCCGGCG CTGGGGAGAG TAG
 
Protein sequence
MTAVDIRRIH PLNRREGQDG PVVYWMSRDQ RAMDNWALLH AQELALERRA PLVVLFTLAP 
SFLGATLRQY GFMLRGLAET AQLLAKMNIP FYLLRGEPVG QLCSFVERNR VGTVVTDFDP
LRVKRVWREG AARLCGVPFF EVDSHNIVPC RFVSDKQEYG AHTLRPKLRR LLADFLHEFP
PLIPHPHAWP VPFQPLDPQG ILSDLYMDRS VSELSNPLPG TRAAGERLRS FIAQGLEDYG
LRRNDPCCDG QSELSPWLHF GQLAPQRVAL ETVRTLSGSP SSEAFLDELI VRRELSDNFC
LHNQAYDRLE GFPAWALKTL GEHRHDRREY LYTQEQFQDA ETHDPLWNAA QRSLLLGGKM
HGYLRMYWAK KILEWSASPE EALAVAIRLN DRYSLDGRDP NGYAGIAWSM GGVHDRAWGE
RPVFGKIRYM NDRGCRRKFD VDAYIRRWGE