Gene Ppro_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1796 
Symbol 
ID4571723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp1922519 
End bp1923169 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content60% 
IMG OID639755844 
ProductTPR repeat-containing protein 
Protein accessionYP_901466 
Protein GI118580216 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGTT TTCCGTGCTT GCGGCCTGAT CAAGGGCCGC AAGCACGGAT ACGAGTCAAT 
GGTGTCATAC TCATGAAAAA AGAAACGATC CTGATAGCCG TGGCCGCCCT GCTGGTGGGA 
TTTCTGGGCG GCTTCCTGAT CTTCAGCATG AACAGCGAGA AGACGAACCG CCAGGATCAG 
GCACAGGTTT CGGCGCTGGC TGCTCCACTA CCGGACCATG GACGGCGCAT CGCCGAGACC 
GAGGCGATCA TTGCCAGGGA CCCGGGAAAC CTGAAGGCAT GGATTTCCCT GGGGAACGAC 
TTCTTCGATT CCAATCAGCC GAGCAAGGCC ATCCAGGCCT ATGCCCAGGC CCTGGAGATC 
CAACCGGCCA ATCCAGACGT GCTCACCGAC CAGGGGATCA TGTTCCGCAA GCTGGGGTGG 
TATGACAAGG CCCTGGCCAA CTTCCAGAAA GCCCGCGCCC TGAACCCCAG GCACCTGCAG 
AGCCTGTACA ACATGAGCAT CGTTTACACC GTTGACCTGA AACAGCCGGA CCGGGCCGTG 
CCGCTCTGGG AGGCCTATCT CAGAGAGGAC GGTACGAGTG AAACTGCCCG ACAGGTGCGA 
GAGCTGCTGG CGAGCATGAC ACGGCAGGGG GATCACCCGG CCAGGAAATA A
 
Protein sequence
MIRFPCLRPD QGPQARIRVN GVILMKKETI LIAVAALLVG FLGGFLIFSM NSEKTNRQDQ 
AQVSALAAPL PDHGRRIAET EAIIARDPGN LKAWISLGND FFDSNQPSKA IQAYAQALEI 
QPANPDVLTD QGIMFRKLGW YDKALANFQK ARALNPRHLQ SLYNMSIVYT VDLKQPDRAV 
PLWEAYLRED GTSETARQVR ELLASMTRQG DHPARK