Gene Ppro_1469 details

Gene Information

• Locus tag: Ppro_1469
• ID: 4571868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 1568424
• End bp: 1570253
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639755514
• Product: radical SAM domain-containing protein
• Protein accession: YP_901143
• Protein GI: 118579893
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [P] Inorganic ion transport and metabolism
• COG ID: [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component; [COG1180] Pyruvate-formate lyase-activating enzyme

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.447014
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGC TGCGTTGCGA AGTGTGCGAG AGGAGCTGTG TCATATCCAC CGGCGGCCTG 
GGGGCGTGCG GGCGCTATGG GGAGCAAGAT GGCGGTATCG TGGAGCGTTA TCCAAACCAG 
TACCTGGTGG CCTGCCCCAT CTCCATCGAA ACCATGCCCA TGCTCCACTT CCACCCCCGG 
TCAAAGTTCC TCCAGATCAG CAGCACCGGT TGCAACTTCG ACTGTCCCGG TTGCATCTCC 
ACCGTCATCG TCAAGGAGAT GTCCCCTGCC AGCAGTGCCC TGCAACGGCT GACGCCGGAA 
GAGGTGGTCT GCAAGGCCCT GGACAACGAC TGCGTGGGGA TCGCCTTTCT GATGAACGAC 
CCCCTGGCCG GCTTGCCCAG TTTTATCCAG GTGGCGGCCC TGGCTCGCTC CCACGGCCTG 
CTCATGGGGT GCTCGACCAA CGCCTATTTT ACCGAGTCGT CCCTGGCCGC GCTGCTGCCG 
CACCTGGATT TCATCAATAT CGGCTTCAAG GGCTTTTCCG ATCAGGCCTA TGCCGCCTGT 
GGCGCGGCGA GCGTGCAGCC GGTCCTGCGT AACCTGAAAA CTCTCCACGC GGGAGGAGTT 
CATGTGGAGG TCTCCTGCAT CATGCACACC GGCAATATGG AGGAAGTGCG TGATCTGGCC 
CGCCATCTGG CTGGCATCTC GCCGACCATT CCCCTGCAGG TGATGCGCTT CATCCCCCTG 
GAGGGGGCCG AGATCTCCCG GGAGCCATCC ATACGCCAGG CCGAGGAGTT CTGCGCCGGG 
CTTAAGGGGA TACTGGAGTA CGTCTACCTG TTCAACTCAC CTGGCACGGA GCTTTTGCAC 
ACCCGTTGCC CGGGCTGCGG CGAGATCCTG ATCAGGCGGG ACTTCTACGG TCCCATGGGG 
GCCAAATTTC TCGATGCCTG CCCCGGACTG TCGCCGGATA ACCGCTGTCC CCGCTGTCTC 
CGCCGCCTGG AGATGGTCGG AGCGCCGGCG GCCACCGTCT ACCAGGAGGG GGACTTCGAG 
GGGGGATACC CGTTCACGCG GGCACTGGAG ATCATCGAGG CGATGCTGAT CGCCATGGGG 
GTGGACCGCA AGGCAACGGT GGTGCGGGCC TGGGAAGATT TCCTTGGCGC CGGTGACATG 
GGCGGCTTTC ACCGGGCCAT ACAGAAGCCC CGCTGCTACA TCGACATGGT GCGCCATTTC 
GGGAGCGTTG CCGGTGTGGC CGAACAGGGC GAGAGGCTGG CCGTCTATCT GGAACGGCAG 
GTGGCGCGCG TTGAAAAGGA TCTGGCCGGG GTGCGTCATC GACCGAGGGT CTACTATGCC 
ATGGGCACGC CGCTCTTCTA CCTGCGCGGC GGTCGCCTGG AGAACCAGCT GGCCGAAACA 
GCGGGCGGGA TCAGCGTTAA CCGGGCCCTT GAGGCATCCG GCCGCCCCGG CCGAAGCCTT 
TCCGTGGAGC AGCTCAACGA ACTGGACCCG GAGGTTATGG TTATCTCCGC CTTTATCTCC 
AGCAGCGTGG ATGATTTTTA TGCCGAATGC CTCCGCCTGG GGATAACCGC CCAGGCGGTG 
CGGAAACGCA GGATCTACGC CCATCCGGCG CCCGGTTGGG ATTTCGGCAC GCCGCGCTGG 
ATACTGGGGC TGCTGTTTTT GGCACACACC CTCCATCCCG AGCTCTGTCG GGTGGATGTT 
ATGGCCGAAG CGGAGGAGTT TTACCGCAGG TTCTACGGAA CCGGTTTTTC CCCGGCCGGA 
ATGAACCGCT CTTTTGGCAA ACCGTCGGCG AACTGGCAGT GGGGGAGCGG GTCGGTGGAG 
CAGGCTCTCA TGCCGCAAAC AGTGCAATGA 

 

Protein sequence

MEKLRCEVCE RSCVISTGGL GACGRYGEQD GGIVERYPNQ YLVACPISIE TMPMLHFHPR 
SKFLQISSTG CNFDCPGCIS TVIVKEMSPA SSALQRLTPE EVVCKALDND CVGIAFLMND 
PLAGLPSFIQ VAALARSHGL LMGCSTNAYF TESSLAALLP HLDFINIGFK GFSDQAYAAC 
GAASVQPVLR NLKTLHAGGV HVEVSCIMHT GNMEEVRDLA RHLAGISPTI PLQVMRFIPL 
EGAEISREPS IRQAEEFCAG LKGILEYVYL FNSPGTELLH TRCPGCGEIL IRRDFYGPMG 
AKFLDACPGL SPDNRCPRCL RRLEMVGAPA ATVYQEGDFE GGYPFTRALE IIEAMLIAMG 
VDRKATVVRA WEDFLGAGDM GGFHRAIQKP RCYIDMVRHF GSVAGVAEQG ERLAVYLERQ 
VARVEKDLAG VRHRPRVYYA MGTPLFYLRG GRLENQLAET AGGISVNRAL EASGRPGRSL 
SVEQLNELDP EVMVISAFIS SSVDDFYAEC LRLGITAQAV RKRRIYAHPA PGWDFGTPRW 
ILGLLFLAHT LHPELCRVDV MAEAEEFYRR FYGTGFSPAG MNRSFGKPSA NWQWGSGSVE 
QALMPQTVQ