| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1383 |
|---|
| Symbol | |
|---|
| ID | 4574529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1473087 |
|---|
| End bp | 1475195 |
|---|
| Gene Length | 2109 bp |
|---|
| Protein Length | 702 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639755427 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_901057 |
|---|
| Protein GI | 118579807 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00790883 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGC AAAAGCCCAG GAGAAACGCC GGAAACCGCA TGCCTGCACC CACCCACCCC
ATAGCCGCGA AATCGCCTTT ATCCATGGGG CACCCCCTGC TTTGCCAGGC TCTCCGCATG
GCACGGACCA TTCTGCTGTT CGGCCTGCTC TCCTGTTCAC CGGTCCTTGT CTTTGATGAC
GGGGAGGAGC TCACCCAGCT TTCCCTGGAG GAACTGCTGC AGGTCAAGAT CATGTCCGTC
ACCGGCAGTT CCCGCTACGA GCAGGAGGCC AGCGAGGCGC CGGCCAGGGT CAGCATCATC
GACGCCGCCG CCATCCGAAA ATACGGCTAC CGCACCCTGT CCGAGGCGTT GCAGGGGGAG
ACCGGCATCA ACATGACCTA TGACCGGAAT TACGCGTACA TCGGCTACCG GGGATTTTCC
ATGCCGGGGG ACTACAACAC CCGGGTACTG GTGCTTCTGG ACGGCATCAG GCTGAACGAC
GAGGTGTACC ACCAGGCGCC GCTGGGAACG GACTTCCCCC TGGACATGGA CCTGGTGGAG
CGCATCGAGA TCATCCGCGG GCCGAGCAAC TCGCTGTACG GCAACAACGC CTTCCTGCTG
ACGGTGAACG TCATCACCAC CTCGGCCAAG AGAAACGGGG TCAACGTCGC CTCTTCGGTG
GACACCCGCA CCAGGGTAAG CGGACGGATC ACCGCCGAGG CAGATCCCCG GGGCAAGGAC
TGGTCCCTGC TGGTCTCCGG CACCCTCGAC CACGCGCCGG GCAACGACCT GTATTTCAGC
GCCTACGACG ATCCGGCCAA CAACAACGGC AGGAGCAGGG ACTGCGACTA CGAGGGGAAC
GGCAGCTTCT TCCTCAAGGC CGAGAAGGGC GACCTGACCC TGCTGGGCGG TTTCTCCCGC
CGCAGGAAGG GGGTGCCCAC CGGCGCCTTT GACGTCGTTT TCAACGATGA CGGCAACACT
TCCTGGGACG AGCGTTCCTT CGCCGACCTG AGCTACACGA GAGGAAACGG CTCGGGGGAT
TCCCTGAAGG CGCGCACCTA CTACAACGGC TACTTCTATA AGGAACGCTA CATCTATACC
CCGGCCGACC AGACATTTTA CGATTACACC AAAAGCGCCG TGCTGGGGGG AGAGCTGGTG
ATCAGCAGGA AACTCCCCTT CGACAACCAC CTGGTGGGGG GGATCGACTA CCACTATGCC
CTGCTCAGGG ACCAGCGCAC AAAGACGAAG GCGGACGGCA CCACCCTGAA CCTGCACTCC
CCCCAGCACA GCCTGGGAGT TTTCCTGCAG AACGAGTGGC GCATTTCCCC CAACCTGCTG
CTGGATGCGG GGGTACGCTA TGACTACTTC TCCCCCTCCC TGCACACCTT CAACCCCAAG
GCGGCCCTGA TCTACAAGAT CACTGACGAC CTGGTTGCCA AGTACCTGTT CGGCAGGTCA
TTTCGCGCCC CCAACGCTTA CGAGACCGAC TACAAGGATT CCGGCAGCAA CATACACGAC
AACCCGGATC TGAAAGAGGA GTCCATGCTC AGCCACGAGC TGGTGCTGGA GTACTACCAC
GGCCCGGGCC AGCGGCTCTC AATGACCTGG TTCCATTACT CCATCAAGAA CCTGATCAAC
CAGGCCGTGG GGAGCGACGG CACCATGCGC TTCGAGAATA CGGACAGGGT CAGGATCACC
GGCTTCGAAC TGGAGCGGGA GTGGAGTTGG GAGGCCTGGT CCGGCAGGCT GGGCTACAGC
TATCAACGGG CGCGGGATGT GGAGAACGAC ACAGGCCTGA CCAACTCGCC TGAATCGTTG
ATCAAGGCGA AACTCTCCCG CGACTTCCTC AACCGCCGCC TGACCCTGTC GGGAGAACTG
CAGTACCTGT CCCAGGTGGA AACCCTGGTG GCCGGGGTCA AGGGGGGCGA CTACACCCTG
CTGCACCTGA CCGCCCTGGC CCGCAACCTG CTGGTCAAAA ACCTGGACGC GACCATCTCG
GTGCGCAACC TGCTTAACGA GAGCTACACC AATCCCGGAT CCAACGATCA TGTGGAGACC
AGCTATCCGG TGGCCCTGAT CCCCCAGGAT GGCCGCACGG TCACCTTCAA GCTGGAGTAC
CGCTTCTAG
|
|---|
| Protein sequence | MAMQKPRRNA GNRMPAPTHP IAAKSPLSMG HPLLCQALRM ARTILLFGLL SCSPVLVFDD
GEELTQLSLE ELLQVKIMSV TGSSRYEQEA SEAPARVSII DAAAIRKYGY RTLSEALQGE
TGINMTYDRN YAYIGYRGFS MPGDYNTRVL VLLDGIRLND EVYHQAPLGT DFPLDMDLVE
RIEIIRGPSN SLYGNNAFLL TVNVITTSAK RNGVNVASSV DTRTRVSGRI TAEADPRGKD
WSLLVSGTLD HAPGNDLYFS AYDDPANNNG RSRDCDYEGN GSFFLKAEKG DLTLLGGFSR
RRKGVPTGAF DVVFNDDGNT SWDERSFADL SYTRGNGSGD SLKARTYYNG YFYKERYIYT
PADQTFYDYT KSAVLGGELV ISRKLPFDNH LVGGIDYHYA LLRDQRTKTK ADGTTLNLHS
PQHSLGVFLQ NEWRISPNLL LDAGVRYDYF SPSLHTFNPK AALIYKITDD LVAKYLFGRS
FRAPNAYETD YKDSGSNIHD NPDLKEESML SHELVLEYYH GPGQRLSMTW FHYSIKNLIN
QAVGSDGTMR FENTDRVRIT GFELEREWSW EAWSGRLGYS YQRARDVEND TGLTNSPESL
IKAKLSRDFL NRRLTLSGEL QYLSQVETLV AGVKGGDYTL LHLTALARNL LVKNLDATIS
VRNLLNESYT NPGSNDHVET SYPVALIPQD GRTVTFKLEY RF
|
|---|
| |