| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1234 |
|---|
| Symbol | |
|---|
| ID | 4574120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1291933 |
|---|
| End bp | 1292526 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639755274 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_900913 |
|---|
| Protein GI | 118579663 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTC TTGCCGGACT GGAAAGTTTT CTCTTCATCA TCTCATCGGT GCTGCTCTTT
CCGGTGGTCA CCGCTCTGGT GCTGATCACC TGCTGGGTGG TGGTCTTCTT CGGCTGGTTT
CTGCGGGAAT ACCTGGACCG GAGACAGGGA CGCTTCGTCT CCCTGGAGCG CTACCGCACG
GCCCTGGCAA AGGAACTGGA GGCCACCACC GACAAAGCCA ACCTGGACAT CGCTCTGGAG
CGCCTGCTGC AGGCTGCCGA ACTGGGGCTG ATCAAGTCCC TGGACAAAAT CCGCTTCGTC
ATCCGGGTCG GCCCGGCCCT GGGTCTGATG GGAACCCTGA TCCCCATGGG CATCTCGCTC
TCCGCCATGG CCCAGGGGGA CATGCCCAAG ATGGCCGGAA GCATGGTGAC CGCGTTCACC
ACGGTCGTTG TCGGCCTGGC CAGCAGCGTG GTGGCCTATG TCATGTCCCT GGTCAAGGAA
AAGTGGGTGC GGGCCGACAT GCGCGAGATG GAATTCATGA CCGAAGGGAT GCTGCGTTCG
GCGGGCCAGC ACCGGGAGAT CCCCAGGGAG GAAGCAGCGG ATGAGCTTTC TTAA
|
|---|
| Protein sequence | MNILAGLESF LFIISSVLLF PVVTALVLIT CWVVVFFGWF LREYLDRRQG RFVSLERYRT
ALAKELEATT DKANLDIALE RLLQAAELGL IKSLDKIRFV IRVGPALGLM GTLIPMGISL
SAMAQGDMPK MAGSMVTAFT TVVVGLASSV VAYVMSLVKE KWVRADMREM EFMTEGMLRS
AGQHREIPRE EAADELS
|
|---|
| |