Gene Ppro_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1060 
Symbol 
ID4575163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1109045 
End bp1110835 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content61% 
IMG OID639755099 
Producttype II secretion system protein E 
Protein accessionYP_900743 
Protein GI118579493 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAA CCAGAGAACT CACCGTAGAA AACATCGCCC ACCTCTTGAA GCAGCGCGGC 
CTCCTCTCGG CCGCGCAGGT GAAGGACCTC CTGGCGCGGG AAAAAGCCCA GCAAACGCGA
CTGGTTTCCT TGCACCACCC TGGCGCCCTG CGCCGCGGCC ATCCCGTGGC GGAGCTGGTT
TCTCCCGCCG AGCTGATCGC CTCGTTCAAT CTGGAAATCT GCGACGCCCC TGGCTCCTGG
CTGACCGAGG ATGTCATCAC CGAGGTGGTG GCCGACAAGC TGGGCATCCC CTACCTGAAG
ATCGACCCGC TCAAACTCAA CCTGGACGTC GTAACCGCCC ACATCCCGCG TCCCTTCGCC
CTCAAACACC TGATCGTTAC CGTTGCCGAG GAACCGGGGG CCATCACGGT CGCCGTGGCC
AACCCTTTCA ACCTGCATCT GGTGGATGAA CTGGCTGCCG CGCGGAGATT GGCGATCCGG
CGGGTGCTCA GTTCCAAGAG CGATATCCTC AAGATCCTGC GGGAGTTTTA CGGTTTTCGC
GCCTCGGTGG TGGCTGCCGA GGCCGAGGCG GCAAACGGTG TTGACCTGGG CAACCTGGAG
CAGTTTGTCA GGCTTAAGGG GCAGGGGGAG ATCGAGAGTA ACGACAAACA TGTGGTGGCA
GCGGTGGAAT TCCTGCTGCA GTACGCCTTT GACCAGCGTG CCAGCGATAT CCATATCGAG
CCCAAGCGCG AGAAGTCGTT GGTGCGCTTC CGGCTGGACG GGGTCATGCA TAACATCCAC
AGCATTCCCA AGCAGCTGCA CGCCCCGATG GTGTCGCGCA TCAAGCTTCT CTCCCGCATG
GACCTGGCCG AGAAGCGCCG TCCCCAGGAT GGCCGCATCA AGACCAGCGT CAACGCCAAG
GAGATGGAAC TGCGCGTCTC CACCGTACCG GTGGCCTTTG GGGAAAAGGT GGTCATAAGG
ATCTTCGATC CGGATATCCT GCTGCAGGAC CTGGACAGCA TGGGCTTTAA TCCCCGTGAG
CTGACGCTGT ACAACTCCTT CATCAACCGC CCCAACGGCA TTATTCTGGT AACCGGCCCC
ACCGGCAGCG GCAAGACCAC CACGCTCTAC TCCACCCTGA GGAAGCTCTC CTCGCCCGAG
GTCAATATCG TTACGGTAGA GGACCCGATC GAGATGGTAA TGGAGGAGTT CAACCAGATC
GGCGTTCAGC ATGCCATCGG CGTGGGGTTC GATACCATCC TGCGCAACAT CCTGCGCCAG
GACCCGGACG TGATCATGAT CGGCGAAATC CGCGACCGGG AGACCGCTGA AAACGCCGTG
CAGGCCGCTT TGACCGGGCA CCTGGTGCTC TCGACCCTGC ACACCAACGA TTCGGTCTCG
TCCATCATCC GCCTGCTGGA CTTGGGGGTG CCGTCGTTTC TGATCTCGGC CACGGTAATC
GGCATCATCG CCCAGCGCCT GGTGCGCAGG ATCTGCCCTC GTTGCAGGAG CGAGCGGGAA
CTGACTTCTG CCGAACAGGA GTACCTGCGG CTGGGCAAGA AGGGGCTTAC GGTCTGGGAG
GGCAAGGGGT GTAAGGAGTG CCGCGGTACC GGGTACAAGG GGCGCACCGG ACTGTTCGAG
GTGCTGGATA TGAGCGACCG TATCAAGGGA CTGATCAGCG CCGACGTGGA ACTGGCCGAC
CTGCTGGCTG CGGCTGGCGA GGATGGCCTG ATAACCCTGC GCCAGGTGGC GGTGCGCAAG
ATGCTGGAAG GGATCACGAC CTATGAGGAA GTCATCGCCA TGACAGGTTA A
 
Protein sequence
MSETRELTVE NIAHLLKQRG LLSAAQVKDL LAREKAQQTR LVSLHHPGAL RRGHPVAELV 
SPAELIASFN LEICDAPGSW LTEDVITEVV ADKLGIPYLK IDPLKLNLDV VTAHIPRPFA
LKHLIVTVAE EPGAITVAVA NPFNLHLVDE LAAARRLAIR RVLSSKSDIL KILREFYGFR
ASVVAAEAEA ANGVDLGNLE QFVRLKGQGE IESNDKHVVA AVEFLLQYAF DQRASDIHIE
PKREKSLVRF RLDGVMHNIH SIPKQLHAPM VSRIKLLSRM DLAEKRRPQD GRIKTSVNAK
EMELRVSTVP VAFGEKVVIR IFDPDILLQD LDSMGFNPRE LTLYNSFINR PNGIILVTGP
TGSGKTTTLY STLRKLSSPE VNIVTVEDPI EMVMEEFNQI GVQHAIGVGF DTILRNILRQ
DPDVIMIGEI RDRETAENAV QAALTGHLVL STLHTNDSVS SIIRLLDLGV PSFLISATVI
GIIAQRLVRR ICPRCRSERE LTSAEQEYLR LGKKGLTVWE GKGCKECRGT GYKGRTGLFE
VLDMSDRIKG LISADVELAD LLAAAGEDGL ITLRQVAVRK MLEGITTYEE VIAMTG