| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1060 |
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| Symbol | |
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| ID | 4575163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 1109045 |
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| End bp | 1110835 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639755099 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_900743 |
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| Protein GI | 118579493 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAA CCAGAGAACT CACCGTAGAA AACATCGCCC ACCTCTTGAA GCAGCGCGGC
CTCCTCTCGG CCGCGCAGGT GAAGGACCTC CTGGCGCGGG AAAAAGCCCA GCAAACGCGA
CTGGTTTCCT TGCACCACCC TGGCGCCCTG CGCCGCGGCC ATCCCGTGGC GGAGCTGGTT
TCTCCCGCCG AGCTGATCGC CTCGTTCAAT CTGGAAATCT GCGACGCCCC TGGCTCCTGG
CTGACCGAGG ATGTCATCAC CGAGGTGGTG GCCGACAAGC TGGGCATCCC CTACCTGAAG
ATCGACCCGC TCAAACTCAA CCTGGACGTC GTAACCGCCC ACATCCCGCG TCCCTTCGCC
CTCAAACACC TGATCGTTAC CGTTGCCGAG GAACCGGGGG CCATCACGGT CGCCGTGGCC
AACCCTTTCA ACCTGCATCT GGTGGATGAA CTGGCTGCCG CGCGGAGATT GGCGATCCGG
CGGGTGCTCA GTTCCAAGAG CGATATCCTC AAGATCCTGC GGGAGTTTTA CGGTTTTCGC
GCCTCGGTGG TGGCTGCCGA GGCCGAGGCG GCAAACGGTG TTGACCTGGG CAACCTGGAG
CAGTTTGTCA GGCTTAAGGG GCAGGGGGAG ATCGAGAGTA ACGACAAACA TGTGGTGGCA
GCGGTGGAAT TCCTGCTGCA GTACGCCTTT GACCAGCGTG CCAGCGATAT CCATATCGAG
CCCAAGCGCG AGAAGTCGTT GGTGCGCTTC CGGCTGGACG GGGTCATGCA TAACATCCAC
AGCATTCCCA AGCAGCTGCA CGCCCCGATG GTGTCGCGCA TCAAGCTTCT CTCCCGCATG
GACCTGGCCG AGAAGCGCCG TCCCCAGGAT GGCCGCATCA AGACCAGCGT CAACGCCAAG
GAGATGGAAC TGCGCGTCTC CACCGTACCG GTGGCCTTTG GGGAAAAGGT GGTCATAAGG
ATCTTCGATC CGGATATCCT GCTGCAGGAC CTGGACAGCA TGGGCTTTAA TCCCCGTGAG
CTGACGCTGT ACAACTCCTT CATCAACCGC CCCAACGGCA TTATTCTGGT AACCGGCCCC
ACCGGCAGCG GCAAGACCAC CACGCTCTAC TCCACCCTGA GGAAGCTCTC CTCGCCCGAG
GTCAATATCG TTACGGTAGA GGACCCGATC GAGATGGTAA TGGAGGAGTT CAACCAGATC
GGCGTTCAGC ATGCCATCGG CGTGGGGTTC GATACCATCC TGCGCAACAT CCTGCGCCAG
GACCCGGACG TGATCATGAT CGGCGAAATC CGCGACCGGG AGACCGCTGA AAACGCCGTG
CAGGCCGCTT TGACCGGGCA CCTGGTGCTC TCGACCCTGC ACACCAACGA TTCGGTCTCG
TCCATCATCC GCCTGCTGGA CTTGGGGGTG CCGTCGTTTC TGATCTCGGC CACGGTAATC
GGCATCATCG CCCAGCGCCT GGTGCGCAGG ATCTGCCCTC GTTGCAGGAG CGAGCGGGAA
CTGACTTCTG CCGAACAGGA GTACCTGCGG CTGGGCAAGA AGGGGCTTAC GGTCTGGGAG
GGCAAGGGGT GTAAGGAGTG CCGCGGTACC GGGTACAAGG GGCGCACCGG ACTGTTCGAG
GTGCTGGATA TGAGCGACCG TATCAAGGGA CTGATCAGCG CCGACGTGGA ACTGGCCGAC
CTGCTGGCTG CGGCTGGCGA GGATGGCCTG ATAACCCTGC GCCAGGTGGC GGTGCGCAAG
ATGCTGGAAG GGATCACGAC CTATGAGGAA GTCATCGCCA TGACAGGTTA A
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| Protein sequence | MSETRELTVE NIAHLLKQRG LLSAAQVKDL LAREKAQQTR LVSLHHPGAL RRGHPVAELV
SPAELIASFN LEICDAPGSW LTEDVITEVV ADKLGIPYLK IDPLKLNLDV VTAHIPRPFA
LKHLIVTVAE EPGAITVAVA NPFNLHLVDE LAAARRLAIR RVLSSKSDIL KILREFYGFR
ASVVAAEAEA ANGVDLGNLE QFVRLKGQGE IESNDKHVVA AVEFLLQYAF DQRASDIHIE
PKREKSLVRF RLDGVMHNIH SIPKQLHAPM VSRIKLLSRM DLAEKRRPQD GRIKTSVNAK
EMELRVSTVP VAFGEKVVIR IFDPDILLQD LDSMGFNPRE LTLYNSFINR PNGIILVTGP
TGSGKTTTLY STLRKLSSPE VNIVTVEDPI EMVMEEFNQI GVQHAIGVGF DTILRNILRQ
DPDVIMIGEI RDRETAENAV QAALTGHLVL STLHTNDSVS SIIRLLDLGV PSFLISATVI
GIIAQRLVRR ICPRCRSERE LTSAEQEYLR LGKKGLTVWE GKGCKECRGT GYKGRTGLFE
VLDMSDRIKG LISADVELAD LLAAAGEDGL ITLRQVAVRK MLEGITTYEE VIAMTG
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