| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0957 |
|---|
| Symbol | |
|---|
| ID | 4574459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1000309 |
|---|
| End bp | 1001070 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639754998 |
|---|
| Product | silent information regulator protein Sir2 |
|---|
| Protein accession | YP_900643 |
|---|
| Protein GI | 118579393 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.925274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCAT TGGAGCCGGT AGCCTGCGCC GAGCTGATCA GAAACTCGAA ATCAATGGTC
GCGCTGACCG GGGCGGGCAT ATCCACCGCG GCCGGCATCC CCGACTTCAG GGGGCCCAAG
GGGCTGTACG TCACCCGGCG CTACGACCCC GAACTGGTTT TCGAGATTGA CAACTTTCAG
CGCGCACCGC AGTATTTCTA CGAGTTTACC AGCGATTTTG CCACTGCGGT GAGGGATGTT
GCTCCCACCT TTACCCATCG TTTCCTCGCC CAGCAGGAGC AGGCGGGACA GCTGGAGGGG
GTCATCACCC AGAACATCGA TATCCTGCAC CAGATGGCGG GGAGCAGGAA CGTCCTGGAA
CTGCACGGTT CCTACCGTTC GGCCACCTGC CAGTCCTGCC GCACGCGGTT GCACGAGCTG
GATTACCCTT GGTGGATCGA TGCCATGGCC GGCAGCAGCC ACCCACCGGT GGTACATTGC
CCATCCTGTG ACGGGCTCCT GAAGCCGGAC ATCGTATTTT TCGGCGAAGC GGTCAACGGC
TTTGGTCGGG CCGAAGCCAT GGTCGCAGCC TGCGACCTCT TGCTGGTGCT GGGGTCGTCC
CTGAACGTCA CCCCGGCATC GCTGCTTCCC TACAGCACAT CTGCCCCGAC GGTTATCGTC
AATCGGGGCA GCGTCATGTT GCCGCCAGCT CCCAACCGCT ACTTCGTGGA CGAGGATCTG
GACGACTATT TCACGAAGGT TGCGGACCAT GTGCGGCGCT GA
|
|---|
| Protein sequence | MHPLEPVACA ELIRNSKSMV ALTGAGISTA AGIPDFRGPK GLYVTRRYDP ELVFEIDNFQ
RAPQYFYEFT SDFATAVRDV APTFTHRFLA QQEQAGQLEG VITQNIDILH QMAGSRNVLE
LHGSYRSATC QSCRTRLHEL DYPWWIDAMA GSSHPPVVHC PSCDGLLKPD IVFFGEAVNG
FGRAEAMVAA CDLLLVLGSS LNVTPASLLP YSTSAPTVIV NRGSVMLPPA PNRYFVDEDL
DDYFTKVADH VRR
|
|---|
| |