| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0749 |
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| Symbol | |
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| ID | 4572021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 789222 |
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| End bp | 790847 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639754792 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit |
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| Protein accession | YP_900437 |
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| Protein GI | 118579187 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000017058 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAC CCGAATTCCA GTACCAGGAT CCTTTTCCAC TCGCTAAAGA CGAGACGAAG
TATCGCAAGA TCGAGGGCTC GGAGAAATAT GTAACCGTCG AGCAGTTCGC CGGCAAGGAT
GTGGTGCGGG TCTGCCCCGA GGCGCTCACC GTACTGGCCA ACGAGGCCAT GAGGGATGTC
TCTTTCTTGC TGCGTCCCGC CCATAATGAG CAGGTGGCAA AGATACTGAG CGACCCCGAA
GCGTCCCAGA ACGACAAGGG TGTTGCCATG GCCTTCCTGC GTAACGCCGA AATCGCGGCC
CAGCTTGACC TGCCGCTCTG CCAGGATACC GGCACCGCCA CGGTCGTTGC CAAGAAGGGG
CAGCAGGTCT GGACCGGCGT CAAGGACGAA GAGTACATCT CCAAGGGGAT CTACAAGACC
TATACCGAGG AAAACCTGCG GTATTCCCAG ACCGTTGCCC TGGATATGTA CAAAGAGGTC
AACACCGGAA CCAACCTGCC CGCCCAGATC GATATCATGG CAACCGATGG CGATTACTAC
AAATTCGTCT TCATGGCCAA GGGGGGCGGT TCCGCCAACA AGACCATGCT CTACCAGGAA
ACCAAGGCCC TGCTGACCCA GGAGAAGCTG GAAAAATTCC TGATCGAAAA GATGAAATAT
CTGGGCACCG CCGCCTGTCC TCCTTACCAC ATCGCCTTCG TCATCGGCGG CACCAGCGCC
GACGCCTGCA TGAAGACCGT CAAACTGGCG ACGGCCAAGG AACTGGACGG GCTTCCCACC
GAGGGTAATG CCCACGGCCA GGCCTTCCGT GACATCGCGC TGGAGAACAA GATGCTGGAA
GCTGCCCAGA AACTCGGTAT CGGCGCACAG TTCGGCGGCA AATACTTCGC CCATGACGTG
CGTGTTATCC GTCTCCCCCG CCACGGCGCC TCCTGCCCGG TGGGCATGGC GGTCTCCTGT
TCGGCCGATC GCAACATCAA GGCCAAGATC ACCAAGGACG GTCTGTTTGT CGAGGAGATG
GACCGCAACC CAGGGCGTCT GATTCCCGAT CGTTTCCGCG GCAAGCATGA GCACGGCGTC
AAGATCGACC TGAACAAGCC GATGCAGGAA GTCCTGGCCG AGTTGACCAA GCACCCGGTT
TCCACACCGC TGCTTTTGAC CGGAACCATT GTTGTGGGCC GCGACATCGC CCATGCCAAG
TTCAAGGAAA TTCTGGACAG CGGCAAGCCG CTGCCCGACT ACCTGAAGAA ACACCCGATC
TACTACGCCG GTCCGGCCAA GACCCCCAAA GGCAAGGCTT CCGGCTCCTT CGGGCCCACT
ACCGCGGGCC GCATGGACTC CTACGTTGAC CTGCTCCAGG CAAACGGCGG CTCCATGATC
ATGATCGCCA AGGGTAACCG CAGCCAGCAG GTTACGGACG CCTGCAAGAA GCACGGCGGT
TTCTATCTCG GCTCCATCGG TGGCCCTGCC GCAGTTCTGG CCGAGGAGAA CATCAAGAAG
GTCGAGTGCA TCGACTTCCC GGAACTGGGC ATGGAAGCGG TCTGGAAGAT CGAAGTGGAG
AACTTCCCCG CCTTCATCCT GGTGGATGAC AACGGTAACG ACTTCTTCAA GCAGCTCGGC
CTGTAA
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| Protein sequence | MATPEFQYQD PFPLAKDETK YRKIEGSEKY VTVEQFAGKD VVRVCPEALT VLANEAMRDV
SFLLRPAHNE QVAKILSDPE ASQNDKGVAM AFLRNAEIAA QLDLPLCQDT GTATVVAKKG
QQVWTGVKDE EYISKGIYKT YTEENLRYSQ TVALDMYKEV NTGTNLPAQI DIMATDGDYY
KFVFMAKGGG SANKTMLYQE TKALLTQEKL EKFLIEKMKY LGTAACPPYH IAFVIGGTSA
DACMKTVKLA TAKELDGLPT EGNAHGQAFR DIALENKMLE AAQKLGIGAQ FGGKYFAHDV
RVIRLPRHGA SCPVGMAVSC SADRNIKAKI TKDGLFVEEM DRNPGRLIPD RFRGKHEHGV
KIDLNKPMQE VLAELTKHPV STPLLLTGTI VVGRDIAHAK FKEILDSGKP LPDYLKKHPI
YYAGPAKTPK GKASGSFGPT TAGRMDSYVD LLQANGGSMI MIAKGNRSQQ VTDACKKHGG
FYLGSIGGPA AVLAEENIKK VECIDFPELG MEAVWKIEVE NFPAFILVDD NGNDFFKQLG
L
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